Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.19■□□□□ 0.34
Col4a6B1AVK5 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.18■□□□□ 0.34
Col4a6B1AVK5 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.18■□□□□ 0.34
Col4a6B1AVK5 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a6B1AVK5 Gm6736-201ENSMUST00000166583 948 ntBASIC17.18■□□□□ 0.34
Col4a6B1AVK5 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.18■□□□□ 0.34
Col4a6B1AVK5 Gm36967-201ENSMUST00000193814 266 ntBASIC17.18■□□□□ 0.34
Col4a6B1AVK5 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a6B1AVK5 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Col4a6B1AVK5 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a6B1AVK5 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a6B1AVK5 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a6B1AVK5 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.18■□□□□ 0.34
Col4a6B1AVK5 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a6B1AVK5 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a6B1AVK5 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a6B1AVK5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a6B1AVK5 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a6B1AVK5 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col4a6B1AVK5 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.17■□□□□ 0.34
Col4a6B1AVK5 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.17■□□□□ 0.34
Col4a6B1AVK5 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Col4a6B1AVK5 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Col4a6B1AVK5 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Col4a6B1AVK5 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a6B1AVK5 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a6B1AVK5 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a6B1AVK5 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a6B1AVK5 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a6B1AVK5 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.17■□□□□ 0.34
Col4a6B1AVK5 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.17■□□□□ 0.34
Col4a6B1AVK5 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a6B1AVK5 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a6B1AVK5 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a6B1AVK5 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a6B1AVK5 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col4a6B1AVK5 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.16■□□□□ 0.34
Col4a6B1AVK5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a6B1AVK5 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Col4a6B1AVK5 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.16■□□□□ 0.34
Col4a6B1AVK5 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a6B1AVK5 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Col4a6B1AVK5 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.16■□□□□ 0.34
Col4a6B1AVK5 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a6B1AVK5 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Col4a6B1AVK5 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a6B1AVK5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a6B1AVK5 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a6B1AVK5 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a6B1AVK5 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.16■□□□□ 0.34
Col4a6B1AVK5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a6B1AVK5 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a6B1AVK5 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a6B1AVK5 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col4a6B1AVK5 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Col4a6B1AVK5 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a6B1AVK5 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a6B1AVK5 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a6B1AVK5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a6B1AVK5 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Col4a6B1AVK5 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Col4a6B1AVK5 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.15■□□□□ 0.34
Col4a6B1AVK5 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a6B1AVK5 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.15■□□□□ 0.34
Col4a6B1AVK5 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a6B1AVK5 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a6B1AVK5 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a6B1AVK5 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a6B1AVK5 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Col4a6B1AVK5 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.15■□□□□ 0.34
Col4a6B1AVK5 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a6B1AVK5 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col4a6B1AVK5 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.14■□□□□ 0.34
Col4a6B1AVK5 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a6B1AVK5 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a6B1AVK5 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a6B1AVK5 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a6B1AVK5 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a6B1AVK5 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.14■□□□□ 0.33
Col4a6B1AVK5 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.14■□□□□ 0.33
Col4a6B1AVK5 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.14■□□□□ 0.33
Col4a6B1AVK5 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a6B1AVK5 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a6B1AVK5 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Col4a6B1AVK5 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Col4a6B1AVK5 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Col4a6B1AVK5 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a6B1AVK5 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Col4a6B1AVK5 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a6B1AVK5 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a6B1AVK5 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a6B1AVK5 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a6B1AVK5 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col4a6B1AVK5 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a6B1AVK5 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a6B1AVK5 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.13■□□□□ 0.33
Col4a6B1AVK5 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a6B1AVK5 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a6B1AVK5 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a6B1AVK5 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms