Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.6□□□□□ -0.39
Col6a5A6H584 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a5A6H584 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a5A6H584 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a5A6H584 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Col6a5A6H584 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Col6a5A6H584 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.6□□□□□ -0.39
Col6a5A6H584 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Col6a5A6H584 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.6□□□□□ -0.39
Col6a5A6H584 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a5A6H584 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a5A6H584 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a5A6H584 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a5A6H584 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a5A6H584 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a5A6H584 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a5A6H584 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a5A6H584 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a5A6H584 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a5A6H584 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a5A6H584 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a5A6H584 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a5A6H584 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.6□□□□□ -0.39
Col6a5A6H584 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Col6a5A6H584 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.6□□□□□ -0.39
Col6a5A6H584 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a5A6H584 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a5A6H584 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a5A6H584 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.6□□□□□ -0.39
Col6a5A6H584 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a5A6H584 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a5A6H584 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a5A6H584 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC12.6□□□□□ -0.39
Col6a5A6H584 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a5A6H584 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col6a5A6H584 Gm5682-201ENSMUST00000173402 505 ntBASIC12.59□□□□□ -0.39
Col6a5A6H584 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a5A6H584 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.59□□□□□ -0.39
Col6a5A6H584 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Col6a5A6H584 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a5A6H584 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a5A6H584 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Col6a5A6H584 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC12.59□□□□□ -0.39
Col6a5A6H584 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Col6a5A6H584 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Col6a5A6H584 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a5A6H584 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a5A6H584 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a5A6H584 Mir1895-201ENSMUST00000122615 79 ntBASIC12.59□□□□□ -0.39
Col6a5A6H584 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a5A6H584 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a5A6H584 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a5A6H584 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a5A6H584 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a5A6H584 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.59□□□□□ -0.39
Col6a5A6H584 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a5A6H584 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Col6a5A6H584 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC12.59□□□□□ -0.39
Col6a5A6H584 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Col6a5A6H584 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a5A6H584 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a5A6H584 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Col6a5A6H584 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
Col6a5A6H584 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.58□□□□□ -0.39
Col6a5A6H584 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Col6a5A6H584 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col6a5A6H584 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Col6a5A6H584 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col6a5A6H584 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col6a5A6H584 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a5A6H584 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Col6a5A6H584 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a5A6H584 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC12.58□□□□□ -0.4
Col6a5A6H584 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a5A6H584 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.58□□□□□ -0.4
Col6a5A6H584 Gm18187-201ENSMUST00000196476 984 ntBASIC12.58□□□□□ -0.4
Col6a5A6H584 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.58□□□□□ -0.4
Col6a5A6H584 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a5A6H584 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a5A6H584 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a5A6H584 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a5A6H584 Gm17271-201ENSMUST00000165535 355 ntBASIC12.58□□□□□ -0.4
Col6a5A6H584 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.58□□□□□ -0.4
Col6a5A6H584 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.58□□□□□ -0.4
Col6a5A6H584 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.58□□□□□ -0.4
Col6a5A6H584 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a5A6H584 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a5A6H584 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Col6a5A6H584 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a5A6H584 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a5A6H584 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a5A6H584 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a5A6H584 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a5A6H584 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.57□□□□□ -0.4
Col6a5A6H584 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.57□□□□□ -0.4
Col6a5A6H584 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.57□□□□□ -0.4
Col6a5A6H584 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.57□□□□□ -0.4
Col6a5A6H584 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a5A6H584 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a5A6H584 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms