Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn3aA2ASI5 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scn3aA2ASI5 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn3aA2ASI5 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.62■□□□□ 0.57
Scn3aA2ASI5 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.62■□□□□ 0.57
Scn3aA2ASI5 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.62■□□□□ 0.57
Scn3aA2ASI5 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Scn3aA2ASI5 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scn3aA2ASI5 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Scn3aA2ASI5 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.62■□□□□ 0.57
Scn3aA2ASI5 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn3aA2ASI5 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn3aA2ASI5 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn3aA2ASI5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scn3aA2ASI5 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Gm11452-201ENSMUST00000122376 690 ntBASIC18.61■□□□□ 0.57
Scn3aA2ASI5 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Gm13884-201ENSMUST00000118103 829 ntBASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Gm7506-201ENSMUST00000207758 815 ntBASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
Scn3aA2ASI5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.6■□□□□ 0.57
Scn3aA2ASI5 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn3aA2ASI5 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn3aA2ASI5 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.6■□□□□ 0.57
Scn3aA2ASI5 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.6■□□□□ 0.57
Scn3aA2ASI5 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Scn3aA2ASI5 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn3aA2ASI5 Gm25745-201ENSMUST00000174945 133 ntBASIC18.6■□□□□ 0.57
Scn3aA2ASI5 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Scn3aA2ASI5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn3aA2ASI5 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn3aA2ASI5 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn3aA2ASI5 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn3aA2ASI5 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn3aA2ASI5 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn3aA2ASI5 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn3aA2ASI5 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn3aA2ASI5 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
Scn3aA2ASI5 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scn3aA2ASI5 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn3aA2ASI5 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn3aA2ASI5 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn3aA2ASI5 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.59■□□□□ 0.57
Scn3aA2ASI5 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn3aA2ASI5 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.59■□□□□ 0.57
Scn3aA2ASI5 Gm18733-201ENSMUST00000173950 856 ntBASIC18.59■□□□□ 0.57
Scn3aA2ASI5 Gm36967-201ENSMUST00000193814 266 ntBASIC18.59■□□□□ 0.57
Scn3aA2ASI5 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn3aA2ASI5 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Scn3aA2ASI5 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn3aA2ASI5 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn3aA2ASI5 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Scn3aA2ASI5 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Scn3aA2ASI5 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn3aA2ASI5 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Scn3aA2ASI5 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.58■□□□□ 0.56
Scn3aA2ASI5 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Scn3aA2ASI5 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn3aA2ASI5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn3aA2ASI5 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn3aA2ASI5 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn3aA2ASI5 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn3aA2ASI5 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scn3aA2ASI5 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn3aA2ASI5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn3aA2ASI5 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Scn3aA2ASI5 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Scn3aA2ASI5 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
Scn3aA2ASI5 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
Scn3aA2ASI5 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn3aA2ASI5 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.57■□□□□ 0.56
Scn3aA2ASI5 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.57■□□□□ 0.56
Scn3aA2ASI5 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn3aA2ASI5 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Scn3aA2ASI5 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms