Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm26399-201ENSMUST00000103937 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC8.8□□□□□ -1
Ubr4A2AN08 Gm25349-201ENSMUST00000177728 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm23616-201ENSMUST00000177797 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm25871-201ENSMUST00000177816 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm24752-201ENSMUST00000178240 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm24496-201ENSMUST00000178287 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm25649-201ENSMUST00000178476 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm25548-201ENSMUST00000178681 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm23147-201ENSMUST00000178841 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm26095-201ENSMUST00000179270 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm22171-201ENSMUST00000179283 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm23936-201ENSMUST00000179354 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm22619-201ENSMUST00000179516 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm25255-201ENSMUST00000179579 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm24755-201ENSMUST00000179691 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm26506-201ENSMUST00000179692 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm25086-201ENSMUST00000179931 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm23243-201ENSMUST00000180047 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm24659-201ENSMUST00000180212 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm24169-201ENSMUST00000180244 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm23689-201ENSMUST00000180354 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm27359-201ENSMUST00000184153 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm27785-201ENSMUST00000184268 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm27466-201ENSMUST00000184396 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm27703-201ENSMUST00000184836 110 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ubr4A2AN08 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ubr4A2AN08 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ubr4A2AN08 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC8.8□□□□□ -1
Ubr4A2AN08 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Ubr4A2AN08 AL593843.1-201ENSMUST00000195891 145 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Gm45747-201ENSMUST00000212203 999 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Grk6-206ENSMUST00000224995 2971 ntBASIC8.8□□□□□ -1
Ubr4A2AN08 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ubr4A2AN08 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ubr4A2AN08 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ubr4A2AN08 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC8.8□□□□□ -1
Ubr4A2AN08 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ubr4A2AN08 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ubr4A2AN08 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ubr4A2AN08 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ubr4A2AN08 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC8.8□□□□□ -1
Ubr4A2AN08 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ubr4A2AN08 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ubr4A2AN08 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Ubr4A2AN08 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Ubr4A2AN08 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ubr4A2AN08 Gm15487-201ENSMUST00000122373 465 ntBASIC8.79□□□□□ -1
Ubr4A2AN08 Gm27300-201ENSMUST00000184085 97 ntBASIC8.79□□□□□ -1
Ubr4A2AN08 Gm27335-201ENSMUST00000184758 97 ntBASIC8.79□□□□□ -1
Ubr4A2AN08 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC8.79□□□□□ -1
Ubr4A2AN08 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
Ubr4A2AN08 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ubr4A2AN08 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ubr4A2AN08 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ubr4A2AN08 Mir7032-201ENSMUST00000185154 79 ntBASIC8.79□□□□□ -1
Ubr4A2AN08 Gm44450-201ENSMUST00000199528 114 ntBASIC8.79□□□□□ -1
Ubr4A2AN08 AC154239.3-201ENSMUST00000226933 674 ntBASIC8.79□□□□□ -1
Ubr4A2AN08 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ubr4A2AN08 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ubr4A2AN08 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Ubr4A2AN08 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ubr4A2AN08 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ubr4A2AN08 AC159621.2-201ENSMUST00000223519 1326 ntBASIC8.79□□□□□ -1
Ubr4A2AN08 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Ubr4A2AN08 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ubr4A2AN08 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ubr4A2AN08 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ubr4A2AN08 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ubr4A2AN08 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Ubr4A2AN08 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ubr4A2AN08 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ubr4A2AN08 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ubr4A2AN08 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC8.79□□□□□ -1
Ubr4A2AN08 Mir6990-201ENSMUST00000183724 91 ntBASIC8.79□□□□□ -1
Ubr4A2AN08 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC8.79□□□□□ -1
Ubr4A2AN08 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ubr4A2AN08 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ubr4A2AN08 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ubr4A2AN08 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ubr4A2AN08 Gm11425-201ENSMUST00000119608 498 ntBASIC8.78□□□□□ -1
Ubr4A2AN08 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ubr4A2AN08 Gm9396-201ENSMUST00000076703 567 ntBASIC8.78□□□□□ -1
Ubr4A2AN08 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ubr4A2AN08 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ubr4A2AN08 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC8.78□□□□□ -1
Ubr4A2AN08 Gm27301-201ENSMUST00000184012 127 ntBASIC8.78□□□□□ -1
Ubr4A2AN08 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC8.78□□□□□ -1
Ubr4A2AN08 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Ubr4A2AN08 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ubr4A2AN08 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Ubr4A2AN08 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ubr4A2AN08 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ubr4A2AN08 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ubr4A2AN08 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC8.78□□□□□ -1
Ubr4A2AN08 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ubr4A2AN08 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC8.78□□□□□ -1
Ubr4A2AN08 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ubr4A2AN08 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms