Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Shroom2A2ALU4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Shroom2A2ALU4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Shroom2A2ALU4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
Shroom2A2ALU4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Shroom2A2ALU4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Shroom2A2ALU4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Shroom2A2ALU4 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Shroom2A2ALU4 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Shroom2A2ALU4 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Shroom2A2ALU4 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC26.36■■□□□ 1.81
Shroom2A2ALU4 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC26.36■■□□□ 1.81
Shroom2A2ALU4 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC26.36■■□□□ 1.81
Shroom2A2ALU4 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Shroom2A2ALU4 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Shroom2A2ALU4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Shroom2A2ALU4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Shroom2A2ALU4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Shroom2A2ALU4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Shroom2A2ALU4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Shroom2A2ALU4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Shroom2A2ALU4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Shroom2A2ALU4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Shroom2A2ALU4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Shroom2A2ALU4 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Shroom2A2ALU4 Gm8825-201ENSMUST00000182565 998 ntBASIC26.35■■□□□ 1.81
Shroom2A2ALU4 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Shroom2A2ALU4 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
Shroom2A2ALU4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC26.35■■□□□ 1.81
Shroom2A2ALU4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Shroom2A2ALU4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Shroom2A2ALU4 Gm35558-201ENSMUST00000222675 2219 ntBASIC26.34■■□□□ 1.81
Shroom2A2ALU4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Shroom2A2ALU4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Shroom2A2ALU4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Shroom2A2ALU4 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC26.34■■□□□ 1.81
Shroom2A2ALU4 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Shroom2A2ALU4 AC130829.1-201ENSMUST00000221548 494 ntBASIC26.34■■□□□ 1.81
Shroom2A2ALU4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC26.34■■□□□ 1.81
Shroom2A2ALU4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Shroom2A2ALU4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Shroom2A2ALU4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Shroom2A2ALU4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Shroom2A2ALU4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Shroom2A2ALU4 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC26.33■■□□□ 1.81
Shroom2A2ALU4 Gm13365-201ENSMUST00000121188 973 ntBASIC26.33■■□□□ 1.81
Shroom2A2ALU4 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC26.33■■□□□ 1.81
Shroom2A2ALU4 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC26.33■■□□□ 1.81
Shroom2A2ALU4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Shroom2A2ALU4 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Shroom2A2ALU4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
Shroom2A2ALU4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Shroom2A2ALU4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Shroom2A2ALU4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Shroom2A2ALU4 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Shroom2A2ALU4 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Shroom2A2ALU4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Shroom2A2ALU4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Shroom2A2ALU4 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Shroom2A2ALU4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Shroom2A2ALU4 Gm22175-201ENSMUST00000175007 78 ntBASIC26.31■■□□□ 1.8
Shroom2A2ALU4 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Shroom2A2ALU4 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Shroom2A2ALU4 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Shroom2A2ALU4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC26.31■■□□□ 1.8
Shroom2A2ALU4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Shroom2A2ALU4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Shroom2A2ALU4 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Shroom2A2ALU4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Shroom2A2ALU4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Shroom2A2ALU4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Shroom2A2ALU4 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC26.3■■□□□ 1.8
Shroom2A2ALU4 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
Shroom2A2ALU4 Mir6990-201ENSMUST00000183724 91 ntBASIC26.3■■□□□ 1.8
Shroom2A2ALU4 Gm43474-201ENSMUST00000196415 774 ntBASIC26.3■■□□□ 1.8
Shroom2A2ALU4 AC155729.1-201ENSMUST00000227758 544 ntBASIC26.3■■□□□ 1.8
Shroom2A2ALU4 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Shroom2A2ALU4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Shroom2A2ALU4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Shroom2A2ALU4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Shroom2A2ALU4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Shroom2A2ALU4 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Shroom2A2ALU4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Shroom2A2ALU4 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC26.3■■□□□ 1.8
Shroom2A2ALU4 AC140397.2-201ENSMUST00000224213 834 ntBASIC26.3■■□□□ 1.8
Shroom2A2ALU4 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC26.3■■□□□ 1.8
Shroom2A2ALU4 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Shroom2A2ALU4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Shroom2A2ALU4 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Shroom2A2ALU4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Shroom2A2ALU4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Shroom2A2ALU4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Shroom2A2ALU4 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Shroom2A2ALU4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Shroom2A2ALU4 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC26.29■■□□□ 1.8
Shroom2A2ALU4 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC26.29■■□□□ 1.8
Shroom2A2ALU4 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Shroom2A2ALU4 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Shroom2A2ALU4 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Shroom2A2ALU4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC26.28■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms