Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IsxA1A546 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
IsxA1A546 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IsxA1A546 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IsxA1A546 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
IsxA1A546 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
IsxA1A546 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.6■□□□□ 0.09
IsxA1A546 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IsxA1A546 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
IsxA1A546 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
IsxA1A546 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IsxA1A546 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IsxA1A546 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.6■□□□□ 0.09
IsxA1A546 Gm10418-201ENSMUST00000100943 576 ntBASIC15.6■□□□□ 0.09
IsxA1A546 Gm12933-201ENSMUST00000120203 872 ntBASIC15.6■□□□□ 0.09
IsxA1A546 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.6■□□□□ 0.09
IsxA1A546 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.6■□□□□ 0.09
IsxA1A546 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IsxA1A546 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IsxA1A546 Gm10602-201ENSMUST00000098239 609 ntBASIC15.6■□□□□ 0.09
IsxA1A546 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
IsxA1A546 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
IsxA1A546 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
IsxA1A546 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IsxA1A546 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
IsxA1A546 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IsxA1A546 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IsxA1A546 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IsxA1A546 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.59■□□□□ 0.09
IsxA1A546 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
IsxA1A546 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IsxA1A546 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
IsxA1A546 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
IsxA1A546 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
IsxA1A546 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IsxA1A546 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
IsxA1A546 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IsxA1A546 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IsxA1A546 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IsxA1A546 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IsxA1A546 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
IsxA1A546 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IsxA1A546 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IsxA1A546 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
IsxA1A546 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.59■□□□□ 0.09
IsxA1A546 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
IsxA1A546 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
IsxA1A546 Prob1-201ENSMUST00000097619 3021 ntBASIC15.59■□□□□ 0.09
IsxA1A546 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
IsxA1A546 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
IsxA1A546 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
IsxA1A546 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IsxA1A546 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
IsxA1A546 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IsxA1A546 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IsxA1A546 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
IsxA1A546 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.58■□□□□ 0.08
IsxA1A546 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IsxA1A546 Gm7514-201ENSMUST00000209475 934 ntBASIC15.58■□□□□ 0.08
IsxA1A546 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IsxA1A546 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IsxA1A546 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
IsxA1A546 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IsxA1A546 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IsxA1A546 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IsxA1A546 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IsxA1A546 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
IsxA1A546 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
IsxA1A546 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
IsxA1A546 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
IsxA1A546 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IsxA1A546 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IsxA1A546 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.57■□□□□ 0.08
IsxA1A546 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IsxA1A546 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.57■□□□□ 0.08
IsxA1A546 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IsxA1A546 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
IsxA1A546 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
IsxA1A546 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IsxA1A546 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IsxA1A546 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.57■□□□□ 0.08
IsxA1A546 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IsxA1A546 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IsxA1A546 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IsxA1A546 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
IsxA1A546 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
IsxA1A546 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
IsxA1A546 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IsxA1A546 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
IsxA1A546 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
IsxA1A546 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
IsxA1A546 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IsxA1A546 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IsxA1A546 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
IsxA1A546 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IsxA1A546 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IsxA1A546 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IsxA1A546 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
IsxA1A546 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
IsxA1A546 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms