Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm5580A0A0N4SVP8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5580A0A0N4SVP8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5580A0A0N4SVP8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5580A0A0N4SVP8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Gm5580A0A0N4SVP8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.24■□□□□ 0.51
Gm5580A0A0N4SVP8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5580A0A0N4SVP8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5580A0A0N4SVP8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5580A0A0N4SVP8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Gm5580A0A0N4SVP8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5580A0A0N4SVP8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.24■□□□□ 0.51
Gm5580A0A0N4SVP8 Gm22240-201ENSMUST00000175225 82 ntBASIC18.24■□□□□ 0.51
Gm5580A0A0N4SVP8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5580A0A0N4SVP8 Gm8520-201ENSMUST00000186517 868 ntBASIC18.24■□□□□ 0.51
Gm5580A0A0N4SVP8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.24■□□□□ 0.51
Gm5580A0A0N4SVP8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.24■□□□□ 0.51
Gm5580A0A0N4SVP8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5580A0A0N4SVP8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Gm5580A0A0N4SVP8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5580A0A0N4SVP8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5580A0A0N4SVP8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5580A0A0N4SVP8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Gm5580A0A0N4SVP8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5580A0A0N4SVP8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Gm5580A0A0N4SVP8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5580A0A0N4SVP8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5580A0A0N4SVP8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5580A0A0N4SVP8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5580A0A0N4SVP8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5580A0A0N4SVP8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5580A0A0N4SVP8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.23■□□□□ 0.51
Gm5580A0A0N4SVP8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Gm5580A0A0N4SVP8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5580A0A0N4SVP8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5580A0A0N4SVP8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5580A0A0N4SVP8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5580A0A0N4SVP8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.22■□□□□ 0.51
Gm5580A0A0N4SVP8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Gm5580A0A0N4SVP8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Gm5580A0A0N4SVP8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5580A0A0N4SVP8 Gm12085-201ENSMUST00000119263 940 ntBASIC18.22■□□□□ 0.51
Gm5580A0A0N4SVP8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5580A0A0N4SVP8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Gm5580A0A0N4SVP8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5580A0A0N4SVP8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.22■□□□□ 0.51
Gm5580A0A0N4SVP8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5580A0A0N4SVP8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5580A0A0N4SVP8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Gm5580A0A0N4SVP8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5580A0A0N4SVP8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Gm5580A0A0N4SVP8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5580A0A0N4SVP8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5580A0A0N4SVP8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5580A0A0N4SVP8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Gm5580A0A0N4SVP8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5580A0A0N4SVP8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5580A0A0N4SVP8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5580A0A0N4SVP8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5580A0A0N4SVP8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5580A0A0N4SVP8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5580A0A0N4SVP8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5580A0A0N4SVP8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Gm5580A0A0N4SVP8 Gm15378-201ENSMUST00000121894 207 ntBASIC18.21■□□□□ 0.51
Gm5580A0A0N4SVP8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.21■□□□□ 0.51
Gm5580A0A0N4SVP8 Gm9731-201ENSMUST00000209480 747 ntBASIC18.21■□□□□ 0.51
Gm5580A0A0N4SVP8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5580A0A0N4SVP8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5580A0A0N4SVP8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5580A0A0N4SVP8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5580A0A0N4SVP8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5580A0A0N4SVP8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Gm5580A0A0N4SVP8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5580A0A0N4SVP8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5580A0A0N4SVP8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.21■□□□□ 0.51
Gm5580A0A0N4SVP8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Gm5580A0A0N4SVP8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Gm5580A0A0N4SVP8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5580A0A0N4SVP8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.2■□□□□ 0.5
Gm5580A0A0N4SVP8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5580A0A0N4SVP8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5580A0A0N4SVP8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5580A0A0N4SVP8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5580A0A0N4SVP8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5580A0A0N4SVP8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5580A0A0N4SVP8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5580A0A0N4SVP8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5580A0A0N4SVP8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5580A0A0N4SVP8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Gm5580A0A0N4SVP8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5580A0A0N4SVP8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Gm5580A0A0N4SVP8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5580A0A0N4SVP8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5580A0A0N4SVP8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Gm5580A0A0N4SVP8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5580A0A0N4SVP8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5580A0A0N4SVP8 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5580A0A0N4SVP8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5580A0A0N4SVP8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5580A0A0N4SVP8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms