Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7-5A0A0G2JFX6 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Trav7-5A0A0G2JFX6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7-5A0A0G2JFX6 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7-5A0A0G2JFX6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7-5A0A0G2JFX6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7-5A0A0G2JFX6 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7-5A0A0G2JFX6 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7-5A0A0G2JFX6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7-5A0A0G2JFX6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav7-5A0A0G2JFX6 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7-5A0A0G2JFX6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7-5A0A0G2JFX6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7-5A0A0G2JFX6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.17□□□□□ -0.3
Trav7-5A0A0G2JFX6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7-5A0A0G2JFX6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7-5A0A0G2JFX6 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav7-5A0A0G2JFX6 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.17□□□□□ -0.3
Trav7-5A0A0G2JFX6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.17□□□□□ -0.3
Trav7-5A0A0G2JFX6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Trav7-5A0A0G2JFX6 Gm45058-201ENSMUST00000205810 766 ntBASIC13.17□□□□□ -0.3
Trav7-5A0A0G2JFX6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7-5A0A0G2JFX6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav7-5A0A0G2JFX6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7-5A0A0G2JFX6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7-5A0A0G2JFX6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav7-5A0A0G2JFX6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7-5A0A0G2JFX6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7-5A0A0G2JFX6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav7-5A0A0G2JFX6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7-5A0A0G2JFX6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7-5A0A0G2JFX6 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav7-5A0A0G2JFX6 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7-5A0A0G2JFX6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7-5A0A0G2JFX6 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7-5A0A0G2JFX6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav7-5A0A0G2JFX6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav7-5A0A0G2JFX6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7-5A0A0G2JFX6 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7-5A0A0G2JFX6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav7-5A0A0G2JFX6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav7-5A0A0G2JFX6 Mir5130-201ENSMUST00000175160 84 ntBASIC13.16□□□□□ -0.3
Trav7-5A0A0G2JFX6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7-5A0A0G2JFX6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav7-5A0A0G2JFX6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7-5A0A0G2JFX6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7-5A0A0G2JFX6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7-5A0A0G2JFX6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7-5A0A0G2JFX6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7-5A0A0G2JFX6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav7-5A0A0G2JFX6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7-5A0A0G2JFX6 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
Trav7-5A0A0G2JFX6 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav7-5A0A0G2JFX6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7-5A0A0G2JFX6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7-5A0A0G2JFX6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav7-5A0A0G2JFX6 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7-5A0A0G2JFX6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7-5A0A0G2JFX6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7-5A0A0G2JFX6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7-5A0A0G2JFX6 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7-5A0A0G2JFX6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav7-5A0A0G2JFX6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7-5A0A0G2JFX6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7-5A0A0G2JFX6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7-5A0A0G2JFX6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
Trav7-5A0A0G2JFX6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7-5A0A0G2JFX6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Trav7-5A0A0G2JFX6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav7-5A0A0G2JFX6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7-5A0A0G2JFX6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7-5A0A0G2JFX6 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7-5A0A0G2JFX6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7-5A0A0G2JFX6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav7-5A0A0G2JFX6 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7-5A0A0G2JFX6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7-5A0A0G2JFX6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Trav7-5A0A0G2JFX6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7-5A0A0G2JFX6 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7-5A0A0G2JFX6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7-5A0A0G2JFX6 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav7-5A0A0G2JFX6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7-5A0A0G2JFX6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7-5A0A0G2JFX6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7-5A0A0G2JFX6 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav7-5A0A0G2JFX6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7-5A0A0G2JFX6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav7-5A0A0G2JFX6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7-5A0A0G2JFX6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7-5A0A0G2JFX6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7-5A0A0G2JFX6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7-5A0A0G2JFX6 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav7-5A0A0G2JFX6 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7-5A0A0G2JFX6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav7-5A0A0G2JFX6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7-5A0A0G2JFX6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav7-5A0A0G2JFX6 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav7-5A0A0G2JFX6 Mir7071-201ENSMUST00000184847 69 ntBASIC13.14□□□□□ -0.31
Trav7-5A0A0G2JFX6 Gm7889-201ENSMUST00000185591 958 ntBASIC13.14□□□□□ -0.31
Trav7-5A0A0G2JFX6 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms