Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Gm22697-201ENSMUST00000175194 63 ntBASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Gm6659-201ENSMUST00000174752 547 ntBASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Gm18032-201ENSMUST00000222541 538 ntBASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13n-1A0A0G2JEU8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms