Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Igkv8-28A0A0G2JE47 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Igkv8-28A0A0G2JE47 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Gm14281-201ENSMUST00000121700 1294 ntBASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Gm16011-201ENSMUST00000121567 2662 ntBASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igkv8-28A0A0G2JE47 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv8-28A0A0G2JE47 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv8-28A0A0G2JE47 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms