Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbc1A0A0A6YWV4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbc1A0A0A6YWV4 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbc1A0A0A6YWV4 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trbc1A0A0A6YWV4 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbc1A0A0A6YWV4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbc1A0A0A6YWV4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trbc1A0A0A6YWV4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trbc1A0A0A6YWV4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trbc1A0A0A6YWV4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.38■□□□□ 0.05
Trbc1A0A0A6YWV4 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbc1A0A0A6YWV4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trbc1A0A0A6YWV4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbc1A0A0A6YWV4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Trbc1A0A0A6YWV4 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbc1A0A0A6YWV4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbc1A0A0A6YWV4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbc1A0A0A6YWV4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trbc1A0A0A6YWV4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbc1A0A0A6YWV4 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.37■□□□□ 0.05
Trbc1A0A0A6YWV4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.37■□□□□ 0.05
Trbc1A0A0A6YWV4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.37■□□□□ 0.05
Trbc1A0A0A6YWV4 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.37■□□□□ 0.05
Trbc1A0A0A6YWV4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbc1A0A0A6YWV4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trbc1A0A0A6YWV4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.37■□□□□ 0.05
Trbc1A0A0A6YWV4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.37■□□□□ 0.05
Trbc1A0A0A6YWV4 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbc1A0A0A6YWV4 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.37■□□□□ 0.05
Trbc1A0A0A6YWV4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbc1A0A0A6YWV4 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trbc1A0A0A6YWV4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbc1A0A0A6YWV4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.37■□□□□ 0.05
Trbc1A0A0A6YWV4 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trbc1A0A0A6YWV4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trbc1A0A0A6YWV4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trbc1A0A0A6YWV4 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.36■□□□□ 0.05
Trbc1A0A0A6YWV4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbc1A0A0A6YWV4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbc1A0A0A6YWV4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbc1A0A0A6YWV4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbc1A0A0A6YWV4 Gm13216-201ENSMUST00000117145 591 ntBASIC15.36■□□□□ 0.05
Trbc1A0A0A6YWV4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
Trbc1A0A0A6YWV4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.36■□□□□ 0.05
Trbc1A0A0A6YWV4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.36■□□□□ 0.05
Trbc1A0A0A6YWV4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trbc1A0A0A6YWV4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trbc1A0A0A6YWV4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbc1A0A0A6YWV4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Trbc1A0A0A6YWV4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Trbc1A0A0A6YWV4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbc1A0A0A6YWV4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbc1A0A0A6YWV4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbc1A0A0A6YWV4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbc1A0A0A6YWV4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Trbc1A0A0A6YWV4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.35■□□□□ 0.05
Trbc1A0A0A6YWV4 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbc1A0A0A6YWV4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.35■□□□□ 0.05
Trbc1A0A0A6YWV4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbc1A0A0A6YWV4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbc1A0A0A6YWV4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbc1A0A0A6YWV4 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbc1A0A0A6YWV4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbc1A0A0A6YWV4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbc1A0A0A6YWV4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbc1A0A0A6YWV4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbc1A0A0A6YWV4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trbc1A0A0A6YWV4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbc1A0A0A6YWV4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbc1A0A0A6YWV4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbc1A0A0A6YWV4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbc1A0A0A6YWV4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trbc1A0A0A6YWV4 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbc1A0A0A6YWV4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbc1A0A0A6YWV4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbc1A0A0A6YWV4 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbc1A0A0A6YWV4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbc1A0A0A6YWV4 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.35■□□□□ 0.05
Trbc1A0A0A6YWV4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trbc1A0A0A6YWV4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbc1A0A0A6YWV4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.34■□□□□ 0.05
Trbc1A0A0A6YWV4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Trbc1A0A0A6YWV4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbc1A0A0A6YWV4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
Trbc1A0A0A6YWV4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbc1A0A0A6YWV4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trbc1A0A0A6YWV4 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trbc1A0A0A6YWV4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trbc1A0A0A6YWV4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbc1A0A0A6YWV4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.34■□□□□ 0.05
Trbc1A0A0A6YWV4 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trbc1A0A0A6YWV4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.34■□□□□ 0.05
Trbc1A0A0A6YWV4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbc1A0A0A6YWV4 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.34■□□□□ 0.05
Trbc1A0A0A6YWV4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbc1A0A0A6YWV4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbc1A0A0A6YWV4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbc1A0A0A6YWV4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Trbc1A0A0A6YWV4 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.33■□□□□ 0.05
Trbc1A0A0A6YWV4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms