Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav21-dv12A0A075B6C4 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav21-dv12A0A075B6C4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav21-dv12A0A075B6C4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav21-dv12A0A075B6C4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav21-dv12A0A075B6C4 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav21-dv12A0A075B6C4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav21-dv12A0A075B6C4 Mir1199-201ENSMUST00000117015 119 ntBASIC12.87□□□□□ -0.35
Trav21-dv12A0A075B6C4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav21-dv12A0A075B6C4 Gm17661-201ENSMUST00000170317 270 ntBASIC12.87□□□□□ -0.35
Trav21-dv12A0A075B6C4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav21-dv12A0A075B6C4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav21-dv12A0A075B6C4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav21-dv12A0A075B6C4 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav21-dv12A0A075B6C4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav21-dv12A0A075B6C4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav21-dv12A0A075B6C4 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav21-dv12A0A075B6C4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav21-dv12A0A075B6C4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav21-dv12A0A075B6C4 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav21-dv12A0A075B6C4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav21-dv12A0A075B6C4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav21-dv12A0A075B6C4 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav21-dv12A0A075B6C4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav21-dv12A0A075B6C4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav21-dv12A0A075B6C4 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav21-dv12A0A075B6C4 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav21-dv12A0A075B6C4 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav21-dv12A0A075B6C4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav21-dv12A0A075B6C4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav21-dv12A0A075B6C4 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.86□□□□□ -0.35
Trav21-dv12A0A075B6C4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav21-dv12A0A075B6C4 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav21-dv12A0A075B6C4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav21-dv12A0A075B6C4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav21-dv12A0A075B6C4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav21-dv12A0A075B6C4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav21-dv12A0A075B6C4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav21-dv12A0A075B6C4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav21-dv12A0A075B6C4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav21-dv12A0A075B6C4 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.86□□□□□ -0.35
Trav21-dv12A0A075B6C4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav21-dv12A0A075B6C4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.86□□□□□ -0.35
Trav21-dv12A0A075B6C4 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trav21-dv12A0A075B6C4 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav21-dv12A0A075B6C4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav21-dv12A0A075B6C4 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav21-dv12A0A075B6C4 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav21-dv12A0A075B6C4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav21-dv12A0A075B6C4 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav21-dv12A0A075B6C4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav21-dv12A0A075B6C4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav21-dv12A0A075B6C4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms