Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-5A0A075B6B5 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Flg-201ENSMUST00000050758 1488 ntBASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-5A0A075B6B5 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Gm27454-201ENSMUST00000185090 204 ntBASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Appbp2os-202ENSMUST00000206972 447 ntBASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-5A0A075B6B5 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-5A0A075B6B5 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-5A0A075B6B5 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-5A0A075B6B5 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-5A0A075B6B5 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav6-5A0A075B6B5 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-5A0A075B6B5 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-5A0A075B6B5 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav6-5A0A075B6B5 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Trav6-5A0A075B6B5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Trav6-5A0A075B6B5 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav6-5A0A075B6B5 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav6-5A0A075B6B5 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-5A0A075B6B5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav6-5A0A075B6B5 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-5A0A075B6B5 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-5A0A075B6B5 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-5A0A075B6B5 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-5A0A075B6B5 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-5A0A075B6B5 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-5A0A075B6B5 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-5A0A075B6B5 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav6-5A0A075B6B5 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-5A0A075B6B5 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Trav6-5A0A075B6B5 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-5A0A075B6B5 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-5A0A075B6B5 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-5A0A075B6B5 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-5A0A075B6B5 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-5A0A075B6B5 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-5A0A075B6B5 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav6-5A0A075B6B5 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-5A0A075B6B5 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-5A0A075B6B5 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav6-5A0A075B6B5 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Trav6-5A0A075B6B5 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 110.7 ms