Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Gm5417-201ENSMUST00000079706 384 ntBASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-7A0A075B6B0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 Mir5122-201ENSMUST00000175004 89 ntBASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-7A0A075B6B0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-7A0A075B6B0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Trav6d-7A0A075B6B0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-7A0A075B6B0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-7A0A075B6B0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-7A0A075B6B0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Trav6d-7A0A075B6B0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-7A0A075B6B0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-7A0A075B6B0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-7A0A075B6B0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-7A0A075B6B0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-7A0A075B6B0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trav6d-7A0A075B6B0 Gm37292-201ENSMUST00000192062 758 ntBASIC12.92□□□□□ -0.34
Trav6d-7A0A075B6B0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-7A0A075B6B0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-7A0A075B6B0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-7A0A075B6B0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-7A0A075B6B0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-7A0A075B6B0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-7A0A075B6B0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-7A0A075B6B0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-7A0A075B6B0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-7A0A075B6B0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-7A0A075B6B0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-7A0A075B6B0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-7A0A075B6B0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms