Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 CT030146.1-201ENSMUST00000220919 217 ntBASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Gm27801-201ENSMUST00000184174 223 ntBASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav3-4A0A075B654 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 Gm19430-201ENSMUST00000193847 2137 ntBASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC11.3□□□□□ -0.6
Trav3-4A0A075B654 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav3-4A0A075B654 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms