Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16A0A075B653 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16A0A075B653 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16A0A075B653 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav16A0A075B653 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16A0A075B653 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trav16A0A075B653 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16A0A075B653 Gm7291-201ENSMUST00000199147 382 ntBASIC12.97□□□□□ -0.33
Trav16A0A075B653 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav16A0A075B653 Gm6365-201ENSMUST00000054711 744 ntBASIC12.97□□□□□ -0.33
Trav16A0A075B653 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav16A0A075B653 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav16A0A075B653 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav16A0A075B653 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16A0A075B653 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16A0A075B653 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16A0A075B653 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.97□□□□□ -0.33
Trav16A0A075B653 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16A0A075B653 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav16A0A075B653 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Trav16A0A075B653 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.97□□□□□ -0.33
Trav16A0A075B653 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav16A0A075B653 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav16A0A075B653 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav16A0A075B653 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav16A0A075B653 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav16A0A075B653 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav16A0A075B653 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav16A0A075B653 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav16A0A075B653 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.96□□□□□ -0.33
Trav16A0A075B653 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav16A0A075B653 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav16A0A075B653 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav16A0A075B653 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav16A0A075B653 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav16A0A075B653 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Trav16A0A075B653 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav16A0A075B653 Gm29241-201ENSMUST00000189260 1096 ntBASIC12.96□□□□□ -0.33
Trav16A0A075B653 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav16A0A075B653 Gm10033-202ENSMUST00000211874 928 ntBASIC12.96□□□□□ -0.33
Trav16A0A075B653 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav16A0A075B653 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav16A0A075B653 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav16A0A075B653 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav16A0A075B653 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav16A0A075B653 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.96□□□□□ -0.34
Trav16A0A075B653 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav16A0A075B653 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav16A0A075B653 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Trav16A0A075B653 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Trav16A0A075B653 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Trav16A0A075B653 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav16A0A075B653 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16A0A075B653 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16A0A075B653 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16A0A075B653 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav16A0A075B653 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.95□□□□□ -0.34
Trav16A0A075B653 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16A0A075B653 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16A0A075B653 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.95□□□□□ -0.34
Trav16A0A075B653 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16A0A075B653 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16A0A075B653 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav16A0A075B653 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16A0A075B653 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
Trav16A0A075B653 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav16A0A075B653 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav16A0A075B653 Gm44549-201ENSMUST00000208351 577 ntBASIC12.95□□□□□ -0.34
Trav16A0A075B653 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16A0A075B653 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16A0A075B653 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16A0A075B653 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16A0A075B653 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.95□□□□□ -0.34
Trav16A0A075B653 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16A0A075B653 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16A0A075B653 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16A0A075B653 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16A0A075B653 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16A0A075B653 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16A0A075B653 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav16A0A075B653 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16A0A075B653 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16A0A075B653 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16A0A075B653 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16A0A075B653 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav16A0A075B653 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16A0A075B653 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16A0A075B653 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.94□□□□□ -0.34
Trav16A0A075B653 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16A0A075B653 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16A0A075B653 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16A0A075B653 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16A0A075B653 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16A0A075B653 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16A0A075B653 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16A0A075B653 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16A0A075B653 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16A0A075B653 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16A0A075B653 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav16A0A075B653 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms