Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-4-dv10A0A075B651 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-4-dv10A0A075B651 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-4-dv10A0A075B651 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-4-dv10A0A075B651 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav4-4-dv10A0A075B651 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-4-dv10A0A075B651 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.05□□□□□ -0.32
Trav4-4-dv10A0A075B651 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-4-dv10A0A075B651 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-4-dv10A0A075B651 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav4-4-dv10A0A075B651 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-4-dv10A0A075B651 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-4-dv10A0A075B651 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-4-dv10A0A075B651 Gm8495-201ENSMUST00000188740 694 ntBASIC13.05□□□□□ -0.32
Trav4-4-dv10A0A075B651 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.05□□□□□ -0.32
Trav4-4-dv10A0A075B651 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-4-dv10A0A075B651 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-4-dv10A0A075B651 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav4-4-dv10A0A075B651 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-4-dv10A0A075B651 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-4-dv10A0A075B651 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-4-dv10A0A075B651 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-4-dv10A0A075B651 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-4-dv10A0A075B651 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav4-4-dv10A0A075B651 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav4-4-dv10A0A075B651 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav4-4-dv10A0A075B651 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav4-4-dv10A0A075B651 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.02□□□□□ -0.32
Trav4-4-dv10A0A075B651 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trav4-4-dv10A0A075B651 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trav4-4-dv10A0A075B651 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav4-4-dv10A0A075B651 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav4-4-dv10A0A075B651 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav4-4-dv10A0A075B651 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav4-4-dv10A0A075B651 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.02□□□□□ -0.32
Trav4-4-dv10A0A075B651 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav4-4-dv10A0A075B651 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trav4-4-dv10A0A075B651 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav4-4-dv10A0A075B651 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trav4-4-dv10A0A075B651 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav4-4-dv10A0A075B651 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4-4-dv10A0A075B651 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4-4-dv10A0A075B651 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav4-4-dv10A0A075B651 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4-4-dv10A0A075B651 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4-4-dv10A0A075B651 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms