Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-7-dv9A0A075B639 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-7-dv9A0A075B639 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav6-7-dv9A0A075B639 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-7-dv9A0A075B639 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Gm27011-201ENSMUST00000182352 972 ntBASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-7-dv9A0A075B639 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-7-dv9A0A075B639 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-7-dv9A0A075B639 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-7-dv9A0A075B639 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-7-dv9A0A075B639 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-7-dv9A0A075B639 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav6-7-dv9A0A075B639 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-7-dv9A0A075B639 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-7-dv9A0A075B639 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-7-dv9A0A075B639 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav6-7-dv9A0A075B639 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav6-7-dv9A0A075B639 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.79□□□□□ -0.04
Trav6-7-dv9A0A075B639 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-7-dv9A0A075B639 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.79□□□□□ -0.04
Trav6-7-dv9A0A075B639 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.79□□□□□ -0.04
Trav6-7-dv9A0A075B639 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Trav6-7-dv9A0A075B639 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-7-dv9A0A075B639 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-7-dv9A0A075B639 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-7-dv9A0A075B639 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-7-dv9A0A075B639 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-7-dv9A0A075B639 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-7-dv9A0A075B639 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-7-dv9A0A075B639 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-7-dv9A0A075B639 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-7-dv9A0A075B639 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-7-dv9A0A075B639 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-7-dv9A0A075B639 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-7-dv9A0A075B639 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-7-dv9A0A075B639 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav6-7-dv9A0A075B639 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav6-7-dv9A0A075B639 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav6-7-dv9A0A075B639 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav6-7-dv9A0A075B639 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms