Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Smad6-203ENSMUST00000179458 273 ntBASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav4n-4A0A075B615 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav4n-4A0A075B615 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.65□□□□□ -0.54
Trav4n-4A0A075B615 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav4n-4A0A075B615 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav4n-4A0A075B615 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav4n-4A0A075B615 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav4n-4A0A075B615 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav4n-4A0A075B615 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav4n-4A0A075B615 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav4n-4A0A075B615 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav4n-4A0A075B615 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav4n-4A0A075B615 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav4n-4A0A075B615 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC11.65□□□□□ -0.54
Trav4n-4A0A075B615 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav4n-4A0A075B615 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav4n-4A0A075B615 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav4n-4A0A075B615 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav4n-4A0A075B615 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav4n-4A0A075B615 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Trav4n-4A0A075B615 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav4n-4A0A075B615 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav4n-4A0A075B615 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav4n-4A0A075B615 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav4n-4A0A075B615 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav4n-4A0A075B615 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Golgb1-201ENSMUST00000023534 498 ntBASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav4n-4A0A075B615 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms