Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-6A0A075B603 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-6A0A075B603 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Gm13148-201ENSMUST00000118892 745 ntBASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Gm5408-201ENSMUST00000197998 747 ntBASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-6A0A075B603 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-6A0A075B603 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms