Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-1A0A075B5Z8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav6-1A0A075B5Z8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Trav6-1A0A075B5Z8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-1A0A075B5Z8 Gm27405-201ENSMUST00000184201 112 ntBASIC13.47□□□□□ -0.25
Trav6-1A0A075B5Z8 Gm37292-201ENSMUST00000192062 758 ntBASIC13.47□□□□□ -0.25
Trav6-1A0A075B5Z8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-1A0A075B5Z8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Trav6-1A0A075B5Z8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-1A0A075B5Z8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-1A0A075B5Z8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-1A0A075B5Z8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-1A0A075B5Z8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-1A0A075B5Z8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-1A0A075B5Z8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav6-1A0A075B5Z8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-1A0A075B5Z8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-1A0A075B5Z8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-1A0A075B5Z8 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav6-1A0A075B5Z8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-1A0A075B5Z8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-1A0A075B5Z8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-1A0A075B5Z8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-1A0A075B5Z8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav6-1A0A075B5Z8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-1A0A075B5Z8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-1A0A075B5Z8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav6-1A0A075B5Z8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-1A0A075B5Z8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav6-1A0A075B5Z8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.46□□□□□ -0.25
Trav6-1A0A075B5Z8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-1A0A075B5Z8 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.46□□□□□ -0.25
Trav6-1A0A075B5Z8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-1A0A075B5Z8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-1A0A075B5Z8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-1A0A075B5Z8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-1A0A075B5Z8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-1A0A075B5Z8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-1A0A075B5Z8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-1A0A075B5Z8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
Trav6-1A0A075B5Z8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6-1A0A075B5Z8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6-1A0A075B5Z8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6-1A0A075B5Z8 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-1A0A075B5Z8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav6-1A0A075B5Z8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.44□□□□□ -0.26
Trav6-1A0A075B5Z8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-1A0A075B5Z8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav6-1A0A075B5Z8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav6-1A0A075B5Z8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-1A0A075B5Z8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-1A0A075B5Z8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-1A0A075B5Z8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-1A0A075B5Z8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-1A0A075B5Z8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav6-1A0A075B5Z8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-1A0A075B5Z8 Gm27000-201ENSMUST00000182943 842 ntBASIC13.44□□□□□ -0.26
Trav6-1A0A075B5Z8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav6-1A0A075B5Z8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trav6-1A0A075B5Z8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-1A0A075B5Z8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-1A0A075B5Z8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-1A0A075B5Z8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav6-1A0A075B5Z8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-1A0A075B5Z8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-1A0A075B5Z8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav6-1A0A075B5Z8 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-1A0A075B5Z8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-1A0A075B5Z8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Trav6-1A0A075B5Z8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-1A0A075B5Z8 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav6-1A0A075B5Z8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-1A0A075B5Z8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-1A0A075B5Z8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms