Protein–RNA interactions for Protein: Q9DA19

Cir1, Corepressor interacting with RBPJ 1, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cir1Q9DA19 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Cir1Q9DA19 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Cir1Q9DA19 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Cir1Q9DA19 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cir1Q9DA19 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cir1Q9DA19 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.11■□□□□ 0.81
Cir1Q9DA19 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cir1Q9DA19 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cir1Q9DA19 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cir1Q9DA19 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cir1Q9DA19 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Cir1Q9DA19 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.1■□□□□ 0.81
Cir1Q9DA19 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cir1Q9DA19 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.1■□□□□ 0.81
Cir1Q9DA19 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cir1Q9DA19 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cir1Q9DA19 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.09■□□□□ 0.81
Cir1Q9DA19 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Cir1Q9DA19 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cir1Q9DA19 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
Cir1Q9DA19 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cir1Q9DA19 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cir1Q9DA19 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
Cir1Q9DA19 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cir1Q9DA19 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cir1Q9DA19 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cir1Q9DA19 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cir1Q9DA19 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cir1Q9DA19 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Cir1Q9DA19 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Cir1Q9DA19 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cir1Q9DA19 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cir1Q9DA19 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cir1Q9DA19 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Cir1Q9DA19 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cir1Q9DA19 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cir1Q9DA19 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cir1Q9DA19 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.06■□□□□ 0.8
Cir1Q9DA19 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.06■□□□□ 0.8
Cir1Q9DA19 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cir1Q9DA19 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cir1Q9DA19 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cir1Q9DA19 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cir1Q9DA19 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.04■□□□□ 0.8
Cir1Q9DA19 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cir1Q9DA19 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cir1Q9DA19 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.03■□□□□ 0.8
Cir1Q9DA19 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cir1Q9DA19 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cir1Q9DA19 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cir1Q9DA19 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cir1Q9DA19 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cir1Q9DA19 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cir1Q9DA19 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cir1Q9DA19 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Cir1Q9DA19 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
Cir1Q9DA19 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.02■□□□□ 0.79
Cir1Q9DA19 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.01■□□□□ 0.79
Cir1Q9DA19 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Cir1Q9DA19 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cir1Q9DA19 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cir1Q9DA19 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Cir1Q9DA19 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cir1Q9DA19 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cir1Q9DA19 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cir1Q9DA19 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cir1Q9DA19 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cir1Q9DA19 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.98■□□□□ 0.79
Cir1Q9DA19 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.98■□□□□ 0.79
Cir1Q9DA19 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.98■□□□□ 0.79
Cir1Q9DA19 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cir1Q9DA19 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cir1Q9DA19 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Cir1Q9DA19 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cir1Q9DA19 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cir1Q9DA19 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.96■□□□□ 0.79
Cir1Q9DA19 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cir1Q9DA19 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cir1Q9DA19 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Cir1Q9DA19 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cir1Q9DA19 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cir1Q9DA19 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cir1Q9DA19 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Cir1Q9DA19 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cir1Q9DA19 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cir1Q9DA19 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cir1Q9DA19 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cir1Q9DA19 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.93■□□□□ 0.78
Cir1Q9DA19 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cir1Q9DA19 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cir1Q9DA19 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cir1Q9DA19 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.93■□□□□ 0.78
Cir1Q9DA19 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cir1Q9DA19 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cir1Q9DA19 Gm8503-201ENSMUST00000118131 455 ntBASIC19.92■□□□□ 0.78
Cir1Q9DA19 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Cir1Q9DA19 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cir1Q9DA19 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.91■□□□□ 0.78
Cir1Q9DA19 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cir1Q9DA19 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms