Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rft1Q8C3B8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rft1Q8C3B8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.75■□□□□ 0.91
Rft1Q8C3B8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rft1Q8C3B8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rft1Q8C3B8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Rft1Q8C3B8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rft1Q8C3B8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rft1Q8C3B8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rft1Q8C3B8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.73■□□□□ 0.91
Rft1Q8C3B8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rft1Q8C3B8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rft1Q8C3B8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rft1Q8C3B8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Rft1Q8C3B8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Rft1Q8C3B8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.71■□□□□ 0.91
Rft1Q8C3B8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rft1Q8C3B8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rft1Q8C3B8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rft1Q8C3B8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rft1Q8C3B8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rft1Q8C3B8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rft1Q8C3B8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rft1Q8C3B8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rft1Q8C3B8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rft1Q8C3B8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rft1Q8C3B8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rft1Q8C3B8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rft1Q8C3B8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rft1Q8C3B8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rft1Q8C3B8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rft1Q8C3B8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rft1Q8C3B8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rft1Q8C3B8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rft1Q8C3B8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.65■□□□□ 0.9
Rft1Q8C3B8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rft1Q8C3B8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rft1Q8C3B8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rft1Q8C3B8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.64■□□□□ 0.89
Rft1Q8C3B8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rft1Q8C3B8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rft1Q8C3B8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rft1Q8C3B8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rft1Q8C3B8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rft1Q8C3B8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.61■□□□□ 0.89
Rft1Q8C3B8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rft1Q8C3B8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.6■□□□□ 0.89
Rft1Q8C3B8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rft1Q8C3B8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rft1Q8C3B8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rft1Q8C3B8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rft1Q8C3B8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.59■□□□□ 0.89
Rft1Q8C3B8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rft1Q8C3B8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rft1Q8C3B8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rft1Q8C3B8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rft1Q8C3B8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Rft1Q8C3B8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Rft1Q8C3B8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.58■□□□□ 0.88
Rft1Q8C3B8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rft1Q8C3B8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rft1Q8C3B8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rft1Q8C3B8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rft1Q8C3B8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rft1Q8C3B8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rft1Q8C3B8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rft1Q8C3B8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rft1Q8C3B8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rft1Q8C3B8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rft1Q8C3B8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rft1Q8C3B8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rft1Q8C3B8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rft1Q8C3B8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rft1Q8C3B8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rft1Q8C3B8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rft1Q8C3B8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rft1Q8C3B8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rft1Q8C3B8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rft1Q8C3B8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rft1Q8C3B8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Rft1Q8C3B8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rft1Q8C3B8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rft1Q8C3B8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rft1Q8C3B8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rft1Q8C3B8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rft1Q8C3B8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Rft1Q8C3B8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rft1Q8C3B8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Rft1Q8C3B8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Rft1Q8C3B8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rft1Q8C3B8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rft1Q8C3B8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rft1Q8C3B8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rft1Q8C3B8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rft1Q8C3B8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rft1Q8C3B8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rft1Q8C3B8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.51■□□□□ 0.87
Rft1Q8C3B8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rft1Q8C3B8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rft1Q8C3B8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms