Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Scn10aQ6QIY3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Scn10aQ6QIY3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Scn10aQ6QIY3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Scn10aQ6QIY3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Scn10aQ6QIY3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Scn10aQ6QIY3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC27.94■■■□□ 2.06
Scn10aQ6QIY3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC27.93■■■□□ 2.06
Scn10aQ6QIY3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
Scn10aQ6QIY3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC27.92■■■□□ 2.06
Scn10aQ6QIY3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Scn10aQ6QIY3 Gm16437-201ENSMUST00000025669 507 ntBASIC27.91■■■□□ 2.06
Scn10aQ6QIY3 Mir3960-201ENSMUST00000198213 73 ntBASIC27.9■■■□□ 2.06
Scn10aQ6QIY3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC27.9■■■□□ 2.06
Scn10aQ6QIY3 Gm27502-201ENSMUST00000183495 199 ntBASIC27.9■■■□□ 2.06
Scn10aQ6QIY3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC27.89■■■□□ 2.06
Scn10aQ6QIY3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Scn10aQ6QIY3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Scn10aQ6QIY3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC27.89■■■□□ 2.06
Scn10aQ6QIY3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Scn10aQ6QIY3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Scn10aQ6QIY3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC27.88■■■□□ 2.05
Scn10aQ6QIY3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Scn10aQ6QIY3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC27.88■■■□□ 2.05
Scn10aQ6QIY3 Gm37136-201ENSMUST00000194368 194 ntBASIC27.87■■■□□ 2.05
Scn10aQ6QIY3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC27.86■■■□□ 2.05
Scn10aQ6QIY3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Scn10aQ6QIY3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Scn10aQ6QIY3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Scn10aQ6QIY3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Scn10aQ6QIY3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Scn10aQ6QIY3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27.83■■■□□ 2.05
Scn10aQ6QIY3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Scn10aQ6QIY3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Scn10aQ6QIY3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Scn10aQ6QIY3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Scn10aQ6QIY3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.81■■■□□ 2.04
Scn10aQ6QIY3 Gm7332-201ENSMUST00000118351 454 ntBASIC27.8■■■□□ 2.04
Scn10aQ6QIY3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Scn10aQ6QIY3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
Scn10aQ6QIY3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC27.79■■■□□ 2.04
Scn10aQ6QIY3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Scn10aQ6QIY3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Scn10aQ6QIY3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Scn10aQ6QIY3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Scn10aQ6QIY3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Scn10aQ6QIY3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Scn10aQ6QIY3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27.77■■■□□ 2.04
Scn10aQ6QIY3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Scn10aQ6QIY3 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.75■■■□□ 2.03
Scn10aQ6QIY3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Scn10aQ6QIY3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Scn10aQ6QIY3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
Scn10aQ6QIY3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC27.73■■■□□ 2.03
Scn10aQ6QIY3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC27.73■■■□□ 2.03
Scn10aQ6QIY3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC27.72■■■□□ 2.03
Scn10aQ6QIY3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Scn10aQ6QIY3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
Scn10aQ6QIY3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Scn10aQ6QIY3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Scn10aQ6QIY3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Scn10aQ6QIY3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Scn10aQ6QIY3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC27.7■■■□□ 2.03
Scn10aQ6QIY3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC27.7■■■□□ 2.03
Scn10aQ6QIY3 AC151971.4-201ENSMUST00000214717 704 ntBASIC27.7■■■□□ 2.03
Scn10aQ6QIY3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Scn10aQ6QIY3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Scn10aQ6QIY3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Scn10aQ6QIY3 Gm13889-201ENSMUST00000099689 1386 ntBASIC27.69■■■□□ 2.02
Scn10aQ6QIY3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Scn10aQ6QIY3 Gm12818-201ENSMUST00000117562 1349 ntBASIC27.68■■■□□ 2.02
Scn10aQ6QIY3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC27.68■■■□□ 2.02
Scn10aQ6QIY3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Scn10aQ6QIY3 Gm14523-201ENSMUST00000117260 558 ntBASIC27.67■■■□□ 2.02
Scn10aQ6QIY3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Scn10aQ6QIY3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Scn10aQ6QIY3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Scn10aQ6QIY3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Scn10aQ6QIY3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Scn10aQ6QIY3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Scn10aQ6QIY3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Scn10aQ6QIY3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Scn10aQ6QIY3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
Scn10aQ6QIY3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
Scn10aQ6QIY3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
Scn10aQ6QIY3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Scn10aQ6QIY3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC27.64■■■□□ 2.01
Scn10aQ6QIY3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Scn10aQ6QIY3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Scn10aQ6QIY3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Scn10aQ6QIY3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Scn10aQ6QIY3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
Scn10aQ6QIY3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Scn10aQ6QIY3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
Scn10aQ6QIY3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Scn10aQ6QIY3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Scn10aQ6QIY3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC27.59■■■□□ 2.01
Scn10aQ6QIY3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Scn10aQ6QIY3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Scn10aQ6QIY3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC27.57■■■□□ 2
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms