Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 Gm16437-201ENSMUST00000025669 507 ntBASIC37,05■■■■□ 3,52
Ccdc141E9Q8Q6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC37,05■■■■□ 3,52
Ccdc141E9Q8Q6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC37,04■■■■□ 3,52
Ccdc141E9Q8Q6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC37,04■■■■□ 3,52
Ccdc141E9Q8Q6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC37,04■■■■□ 3,52
Ccdc141E9Q8Q6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC37,03■■■■□ 3,52
Ccdc141E9Q8Q6 Gm27502-201ENSMUST00000183495 199 ntBASIC37,03■■■■□ 3,52
Ccdc141E9Q8Q6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC37,03■■■■□ 3,52
Ccdc141E9Q8Q6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC37,03■■■■□ 3,52
Ccdc141E9Q8Q6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC37,02■■■■□ 3,52
Ccdc141E9Q8Q6 Mir3960-201ENSMUST00000198213 73 ntBASIC37■■■■□ 3,51
Ccdc141E9Q8Q6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC37■■■■□ 3,51
Ccdc141E9Q8Q6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC36,98■■■■□ 3,51
Ccdc141E9Q8Q6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC36,98■■■■□ 3,51
Ccdc141E9Q8Q6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC36,97■■■■□ 3,51
Ccdc141E9Q8Q6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC36,95■■■■□ 3,51
Ccdc141E9Q8Q6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC36,95■■■■□ 3,51
Ccdc141E9Q8Q6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC36,95■■■■□ 3,5
Ccdc141E9Q8Q6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC36,94■■■■□ 3,5
Ccdc141E9Q8Q6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC36,94■■■■□ 3,5
Ccdc141E9Q8Q6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC36,92■■■■□ 3,5
Ccdc141E9Q8Q6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC36,92■■■■□ 3,5
Ccdc141E9Q8Q6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC36,91■■■■□ 3,5
Ccdc141E9Q8Q6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC36,9■■■■□ 3,5
Ccdc141E9Q8Q6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC36,9■■■■□ 3,5
Ccdc141E9Q8Q6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC36,89■■■■□ 3,5
Ccdc141E9Q8Q6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC36,89■■■■□ 3,5
Ccdc141E9Q8Q6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC36,87■■■■□ 3,49
Ccdc141E9Q8Q6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC36,87■■■■□ 3,49
Ccdc141E9Q8Q6 Gm37136-201ENSMUST00000194368 194 ntBASIC36,86■■■■□ 3,49
Ccdc141E9Q8Q6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC36,85■■■■□ 3,49
Ccdc141E9Q8Q6 Gm7332-201ENSMUST00000118351 454 ntBASIC36,85■■■■□ 3,49
Ccdc141E9Q8Q6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC36,85■■■■□ 3,49
Ccdc141E9Q8Q6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC36,85■■■■□ 3,49
Ccdc141E9Q8Q6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC36,85■■■■□ 3,49
Ccdc141E9Q8Q6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC36,85■■■■□ 3,49
Ccdc141E9Q8Q6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC36,84■■■■□ 3,49
Ccdc141E9Q8Q6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC36,83■■■■□ 3,49
Ccdc141E9Q8Q6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC36,83■■■■□ 3,49
Ccdc141E9Q8Q6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC36,82■■■■□ 3,48
Ccdc141E9Q8Q6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC36,8■■■■□ 3,48
Ccdc141E9Q8Q6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC36,8■■■■□ 3,48
Ccdc141E9Q8Q6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC36,8■■■■□ 3,48
Ccdc141E9Q8Q6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC36,78■■■■□ 3,48
Ccdc141E9Q8Q6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC36,78■■■■□ 3,48
Ccdc141E9Q8Q6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC36,78■■■■□ 3,48
Ccdc141E9Q8Q6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC36,77■■■■□ 3,48
Ccdc141E9Q8Q6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC36,77■■■■□ 3,48
Ccdc141E9Q8Q6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC36,76■■■■□ 3,48
Ccdc141E9Q8Q6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC36,76■■■■□ 3,48
Ccdc141E9Q8Q6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC36,76■■■■□ 3,48
Ccdc141E9Q8Q6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC36,76■■■■□ 3,48
Ccdc141E9Q8Q6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC36,75■■■■□ 3,47
Ccdc141E9Q8Q6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC36,75■■■■□ 3,47
Ccdc141E9Q8Q6 Gm9905-201ENSMUST00000065740 1845 ntBASIC36,74■■■■□ 3,47
Ccdc141E9Q8Q6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC36,72■■■■□ 3,47
Ccdc141E9Q8Q6 Gm13889-201ENSMUST00000099689 1386 ntBASIC36,72■■■■□ 3,47
Ccdc141E9Q8Q6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC36,71■■■■□ 3,47
Ccdc141E9Q8Q6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC36,71■■■■□ 3,47
Ccdc141E9Q8Q6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC36,7■■■■□ 3,47
Ccdc141E9Q8Q6 Gm14523-201ENSMUST00000117260 558 ntBASIC36,69■■■■□ 3,46
Ccdc141E9Q8Q6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC36,69■■■■□ 3,46
Ccdc141E9Q8Q6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC36,69■■■■□ 3,46
Ccdc141E9Q8Q6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC36,68■■■■□ 3,46
Ccdc141E9Q8Q6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC36,68■■■■□ 3,46
Ccdc141E9Q8Q6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC36,67■■■■□ 3,46
Ccdc141E9Q8Q6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC36,65■■■■□ 3,46
Ccdc141E9Q8Q6 Gm12818-201ENSMUST00000117562 1349 ntBASIC36,65■■■■□ 3,46
Ccdc141E9Q8Q6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC36,64■■■■□ 3,46
Ccdc141E9Q8Q6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC36,64■■■■□ 3,46
Ccdc141E9Q8Q6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC36,64■■■■□ 3,46
Ccdc141E9Q8Q6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC36,63■■■■□ 3,45
Ccdc141E9Q8Q6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC36,63■■■■□ 3,45
Ccdc141E9Q8Q6 AC151971.4-201ENSMUST00000214717 704 ntBASIC36,63■■■■□ 3,45
Ccdc141E9Q8Q6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC36,63■■■■□ 3,45
Ccdc141E9Q8Q6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC36,63■■■■□ 3,45
Ccdc141E9Q8Q6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC36,63■■■■□ 3,45
Ccdc141E9Q8Q6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC36,62■■■■□ 3,45
Ccdc141E9Q8Q6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC36,61■■■■□ 3,45
Ccdc141E9Q8Q6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC36,61■■■■□ 3,45
Ccdc141E9Q8Q6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC36,61■■■■□ 3,45
Ccdc141E9Q8Q6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC36,61■■■■□ 3,45
Ccdc141E9Q8Q6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC36,6■■■■□ 3,45
Ccdc141E9Q8Q6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC36,6■■■■□ 3,45
Ccdc141E9Q8Q6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC36,6■■■■□ 3,45
Ccdc141E9Q8Q6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC36,59■■■■□ 3,45
Ccdc141E9Q8Q6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC36,59■■■■□ 3,45
Ccdc141E9Q8Q6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC36,59■■■■□ 3,45
Ccdc141E9Q8Q6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC36,59■■■■□ 3,45
Ccdc141E9Q8Q6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC36,59■■■■□ 3,45
Ccdc141E9Q8Q6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC36,58■■■■□ 3,45
Ccdc141E9Q8Q6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC36,57■■■■□ 3,44
Ccdc141E9Q8Q6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC36,57■■■■□ 3,44
Ccdc141E9Q8Q6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC36,55■■■■□ 3,44
Ccdc141E9Q8Q6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC36,54■■■■□ 3,44
Ccdc141E9Q8Q6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC36,54■■■■□ 3,44
Ccdc141E9Q8Q6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC36,53■■■■□ 3,44
Ccdc141E9Q8Q6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC36,53■■■■□ 3,44
Ccdc141E9Q8Q6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC36,52■■■■□ 3,44
Ccdc141E9Q8Q6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC36,51■■■■□ 3,44
Retrieved 100 of 76,532 protein–RNA pairs in 47,3 ms