Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 AC009120.7-201ENST00000623452 780 ntBASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 AP000550.3-201ENST00000637734 379 ntBASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SMIM28A0A1B0GU29 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.15□□□□□ -1.58
SMIM28A0A1B0GU29 RBPJP2-201ENST00000618187 1444 ntBASIC5.15□□□□□ -1.58
SMIM28A0A1B0GU29 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
SMIM28A0A1B0GU29 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.15□□□□□ -1.58
SMIM28A0A1B0GU29 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 RNU6-167P-201ENST00000384292 106 ntBASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 RPS4XP9-201ENST00000405151 780 ntBASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 RN7SKP106-201ENST00000410832 272 ntBASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 AL807761.1-201ENST00000417622 171 ntBASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 RANP7-201ENST00000418085 644 ntBASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 GYG1P1-201ENST00000460864 698 ntBASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 AC096741.1-201ENST00000472250 846 ntBASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 AL110118.1-201ENST00000553543 400 ntBASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 HMGN2P47-201ENST00000559378 272 ntBASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 AL390726.5-202ENST00000564800 256 ntBASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 AC008745.1-201ENST00000604064 271 ntBASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SMIM28A0A1B0GU29 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 RNU1-82P-201ENST00000390851 165 ntBASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 AL049697.2-201ENST00000403708 294 ntBASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 SNORA81-201ENST00000408493 178 ntBASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 AL355994.1-201ENST00000424379 260 ntBASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 CEACAMP6-201ENST00000452007 574 ntBASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 NDUFA12P1-201ENST00000455914 406 ntBASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 RN7SL354P-201ENST00000469282 294 ntBASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 AC006463.2-201ENST00000473326 348 ntBASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 RN7SL459P-201ENST00000481078 302 ntBASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 AC002456.2-201ENST00000509356 380 ntBASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 RNU6-1334P-201ENST00000516032 105 ntBASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 AL049830.4-201ENST00000555149 351 ntBASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 AC012414.7-202ENST00000622705 1090 ntBASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 AC021106.3-201ENST00000623925 531 ntBASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 AC006453.5-201ENST00000636451 619 ntBASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SMIM28A0A1B0GU29 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 AC104623.2-202ENST00000623477 4002 ntBASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 SNORA70F-201ENST00000384142 135 ntBASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 GLULP6-201ENST00000399502 913 ntBASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 FAR2P2-201ENST00000413041 594 ntBASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 ATG4AP1-201ENST00000416893 538 ntBASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 AC069213.2-201ENST00000420238 366 ntBASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 FAR2P4-202ENST00000425399 584 ntBASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 AC244033.1-201ENST00000426826 870 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms