Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AL136164.3-201ENST00000624429 3978 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 ARHGAP19-201ENST00000358308 5390 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 DCTN4-203ENST00000447998 4208 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 GDA-202ENST00000358399 5340 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 IGF1R-201ENST00000268035 11803 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RNU6-770P-201ENST00000363929 105 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 TANK-206ENST00000406287 875 ntTSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 MIR320B2-201ENST00000408479 138 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 VN1R51P-201ENST00000411675 945 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AL161449.1-201ENST00000414531 1199 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC007562.1-201ENST00000421819 517 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 NUP35P1-201ENST00000422734 947 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC009480.2-201ENST00000422916 432 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RPS4XP16-201ENST00000427198 791 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 MED14P1-201ENST00000430517 648 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC046176.1-201ENST00000435260 1170 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC005297.1-201ENST00000444765 862 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 MTCO3P11-201ENST00000455103 774 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC098847.1-201ENST00000473094 348 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RPSAP51-201ENST00000497462 645 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC111000.3-201ENST00000508057 576 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 MTND6P2-201ENST00000512226 524 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 HMGN2P36-201ENST00000529541 409 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC008055.1-201ENST00000547032 609 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC126335.1-201ENST00000568414 510 ntTSL 2 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC011840.5-201ENST00000582125 771 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC098590.2-201ENST00000614787 281 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AL158062.1-201ENST00000619632 745 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC091903.1-201ENST00000624322 454 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC010608.3-201ENST00000625048 527 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 MFSD8-236ENST00000641509 4050 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 DCAF7-205ENST00000614556 6340 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
HMCN1Q96RW7 MTCO1P22-201ENST00000604619 1360 ntBASIC1.86□□□□□ -2.11
HMCN1Q96RW7 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HMCN1Q96RW7 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HMCN1Q96RW7 CACNB4-246ENST00000637309 7409 ntTSL 5 BASIC1.86□□□□□ -2.11
HMCN1Q96RW7 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
HMCN1Q96RW7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HMCN1Q96RW7 RNA5SP191-201ENST00000362585 102 ntBASIC1.86□□□□□ -2.11
HMCN1Q96RW7 RNU6-668P-201ENST00000364180 107 ntBASIC1.86□□□□□ -2.11
HMCN1Q96RW7 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HMCN1Q96RW7 MIR634-201ENST00000385208 97 ntBASIC1.86□□□□□ -2.11
HMCN1Q96RW7 U3.36-201ENST00000408418 213 ntBASIC1.86□□□□□ -2.11
HMCN1Q96RW7 MIR1302-4-201ENST00000408701 150 ntBASIC1.86□□□□□ -2.11
HMCN1Q96RW7 MIR1252-201ENST00000408861 65 ntBASIC1.86□□□□□ -2.11
HMCN1Q96RW7 RNU6-892P-201ENST00000410335 99 ntBASIC1.86□□□□□ -2.11
HMCN1Q96RW7 Z97055.1-201ENST00000419730 712 ntBASIC1.86□□□□□ -2.11
HMCN1Q96RW7 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HMCN1Q96RW7 AC073508.1-201ENST00000428866 656 ntBASIC1.86□□□□□ -2.11
HMCN1Q96RW7 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC1.86□□□□□ -2.11
HMCN1Q96RW7 RPS7P3-201ENST00000443360 580 ntBASIC1.86□□□□□ -2.11
HMCN1Q96RW7 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC1.86□□□□□ -2.11
HMCN1Q96RW7 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.86□□□□□ -2.11
HMCN1Q96RW7 RPL5P23-201ENST00000496040 868 ntBASIC1.86□□□□□ -2.11
HMCN1Q96RW7 OR5H5P-201ENST00000503164 928 ntBASIC1.86□□□□□ -2.11
HMCN1Q96RW7 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC1.86□□□□□ -2.11
HMCN1Q96RW7 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HMCN1Q96RW7 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.86□□□□□ -2.11
HMCN1Q96RW7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.86□□□□□ -2.11
HMCN1Q96RW7 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.86□□□□□ -2.11
HMCN1Q96RW7 MTND5P21-201ENST00000531961 522 ntBASIC1.86□□□□□ -2.11
HMCN1Q96RW7 OR5AL2P-201ENST00000532185 920 ntBASIC1.86□□□□□ -2.11
HMCN1Q96RW7 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.86□□□□□ -2.11
HMCN1Q96RW7 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.86□□□□□ -2.11
HMCN1Q96RW7 AP005205.1-201ENST00000563503 508 ntBASIC1.86□□□□□ -2.11
HMCN1Q96RW7 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC1.86□□□□□ -2.11
HMCN1Q96RW7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
HMCN1Q96RW7 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.86□□□□□ -2.11
HMCN1Q96RW7 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC1.86□□□□□ -2.11
HMCN1Q96RW7 AC138207.3-201ENST00000585289 166 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms