Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SMAD6O43541 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.36□□□□□ -1.55
SMAD6O43541 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.36□□□□□ -1.55
SMAD6O43541 TRGV7-201ENST00000427089 353 ntBASIC5.36□□□□□ -1.55
SMAD6O43541 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.36□□□□□ -1.55
SMAD6O43541 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.36□□□□□ -1.55
SMAD6O43541 MTND2P40-201ENST00000436718 841 ntBASIC5.36□□□□□ -1.55
SMAD6O43541 PTMAP6-201ENST00000439110 327 ntBASIC5.36□□□□□ -1.55
SMAD6O43541 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.36□□□□□ -1.55
SMAD6O43541 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SMAD6O43541 RN7SL197P-201ENST00000466981 299 ntBASIC5.36□□□□□ -1.55
SMAD6O43541 AC090602.1-201ENST00000469695 252 ntBASIC5.36□□□□□ -1.55
SMAD6O43541 RPL15P21-201ENST00000495592 567 ntBASIC5.36□□□□□ -1.55
SMAD6O43541 RN7SL808P-201ENST00000496066 299 ntBASIC5.36□□□□□ -1.55
SMAD6O43541 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.36□□□□□ -1.55
SMAD6O43541 SEPT10P1-201ENST00000517342 1162 ntBASIC5.36□□□□□ -1.55
SMAD6O43541 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.36□□□□□ -1.55
SMAD6O43541 OR7E13P-201ENST00000526052 910 ntBASIC5.36□□□□□ -1.55
SMAD6O43541 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
SMAD6O43541 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.36□□□□□ -1.55
SMAD6O43541 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.36□□□□□ -1.55
SMAD6O43541 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.36□□□□□ -1.55
SMAD6O43541 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.36□□□□□ -1.55
SMAD6O43541 AC091515.1-201ENST00000548110 679 ntBASIC5.36□□□□□ -1.55
SMAD6O43541 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.36□□□□□ -1.55
SMAD6O43541 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.36□□□□□ -1.55
SMAD6O43541 AL390334.1-201ENST00000556395 450 ntBASIC5.36□□□□□ -1.55
SMAD6O43541 AC027176.2-201ENST00000559166 746 ntBASIC5.36□□□□□ -1.55
SMAD6O43541 AC093510.2-201ENST00000562820 896 ntBASIC5.36□□□□□ -1.55
SMAD6O43541 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.36□□□□□ -1.55
SMAD6O43541 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.36□□□□□ -1.55
SMAD6O43541 AC067838.1-201ENST00000606064 577 ntBASIC5.36□□□□□ -1.55
SMAD6O43541 AL159169.2-201ENST00000610061 1269 ntBASIC5.36□□□□□ -1.55
SMAD6O43541 AC096586.2-201ENST00000610260 441 ntBASIC5.36□□□□□ -1.55
SMAD6O43541 AC005156.1-201ENST00000613371 573 ntBASIC5.36□□□□□ -1.55
SMAD6O43541 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.36□□□□□ -1.55
SMAD6O43541 AP001005.3-201ENST00000622049 129 ntBASIC5.36□□□□□ -1.55
SMAD6O43541 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.36□□□□□ -1.55
SMAD6O43541 AC019226.2-201ENST00000625973 424 ntBASIC5.36□□□□□ -1.55
SMAD6O43541 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.36□□□□□ -1.55
SMAD6O43541 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
SMAD6O43541 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SMAD6O43541 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.36□□□□□ -1.55
SMAD6O43541 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SMAD6O43541 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.36□□□□□ -1.55
SMAD6O43541 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.36□□□□□ -1.55
SMAD6O43541 AC004656.1-201ENST00000568479 4951 ntBASIC5.36□□□□□ -1.55
SMAD6O43541 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SMAD6O43541 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.35□□□□□ -1.55
SMAD6O43541 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.35□□□□□ -1.55
SMAD6O43541 CUL4AP1-201ENST00000514750 1863 ntBASIC5.35□□□□□ -1.55
SMAD6O43541 AC092747.4-201ENST00000620519 1861 ntBASIC5.35□□□□□ -1.55
SMAD6O43541 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
SMAD6O43541 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.35□□□□□ -1.55
SMAD6O43541 MTND5P31-201ENST00000419366 1374 ntBASIC5.35□□□□□ -1.55
SMAD6O43541 OR4K17-201ENST00000315543 1032 ntBASIC5.35□□□□□ -1.55
SMAD6O43541 U3.3-201ENST00000362986 216 ntBASIC5.35□□□□□ -1.55
SMAD6O43541 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SMAD6O43541 SNORA70.6-201ENST00000383934 134 ntBASIC5.35□□□□□ -1.55
SMAD6O43541 AC233289.1-201ENST00000403700 508 ntBASIC5.35□□□□□ -1.55
SMAD6O43541 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.35□□□□□ -1.55
SMAD6O43541 AC106883.1-201ENST00000418805 562 ntBASIC5.35□□□□□ -1.55
SMAD6O43541 MTND2P16-201ENST00000419987 799 ntBASIC5.35□□□□□ -1.55
SMAD6O43541 EI24P4-201ENST00000423683 1078 ntBASIC5.35□□□□□ -1.55
SMAD6O43541 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SMAD6O43541 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.35□□□□□ -1.55
SMAD6O43541 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.35□□□□□ -1.55
SMAD6O43541 MRPL50P1-201ENST00000431951 384 ntBASIC5.35□□□□□ -1.55
SMAD6O43541 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SMAD6O43541 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.35□□□□□ -1.55
SMAD6O43541 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.35□□□□□ -1.55
SMAD6O43541 AC023271.1-201ENST00000445936 1090 ntBASIC5.35□□□□□ -1.55
SMAD6O43541 MTND5P8-201ENST00000449817 1083 ntBASIC5.35□□□□□ -1.55
SMAD6O43541 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.35□□□□□ -1.55
SMAD6O43541 Z92846.1-201ENST00000456203 268 ntBASIC5.35□□□□□ -1.55
SMAD6O43541 AL122001.1-201ENST00000457027 370 ntBASIC5.35□□□□□ -1.55
SMAD6O43541 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.35□□□□□ -1.55
SMAD6O43541 SNRPCP2-201ENST00000504370 475 ntBASIC5.35□□□□□ -1.55
SMAD6O43541 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
SMAD6O43541 AC005351.1-201ENST00000511152 786 ntBASIC5.35□□□□□ -1.55
SMAD6O43541 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.35□□□□□ -1.55
SMAD6O43541 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.35□□□□□ -1.55
SMAD6O43541 AC130364.2-201ENST00000528639 604 ntBASIC5.35□□□□□ -1.55
SMAD6O43541 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.35□□□□□ -1.55
SMAD6O43541 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.35□□□□□ -1.55
SMAD6O43541 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.35□□□□□ -1.55
SMAD6O43541 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.35□□□□□ -1.55
SMAD6O43541 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.35□□□□□ -1.55
SMAD6O43541 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.35□□□□□ -1.55
SMAD6O43541 AC095055.1-201ENST00000603472 1113 ntBASIC5.35□□□□□ -1.55
SMAD6O43541 AL162431.4-201ENST00000604674 411 ntBASIC5.35□□□□□ -1.55
SMAD6O43541 AL021707.7-201ENST00000607991 416 ntBASIC5.35□□□□□ -1.55
SMAD6O43541 AC211433.2-201ENST00000608433 387 ntBASIC5.35□□□□□ -1.55
SMAD6O43541 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.35□□□□□ -1.55
SMAD6O43541 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.35□□□□□ -1.55
SMAD6O43541 AC022079.1-201ENST00000621546 602 ntBASIC5.35□□□□□ -1.55
SMAD6O43541 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.35□□□□□ -1.55
SMAD6O43541 AP000943.4-201ENST00000622912 357 ntBASIC5.35□□□□□ -1.55
SMAD6O43541 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.35□□□□□ -1.55
SMAD6O43541 AC068620.4-201ENST00000636730 1182 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms