Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AL136131.3-201ENST00000607600 188 ntBASIC5.52□□□□□ -1.53
VPS4AQ9UN37 AC245100.7-201ENST00000609678 442 ntBASIC5.52□□□□□ -1.53
VPS4AQ9UN37 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 AP000484.1-201ENST00000620067 1252 ntBASIC5.52□□□□□ -1.53
VPS4AQ9UN37 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 AC073869.7-201ENST00000640874 297 ntBASIC5.52□□□□□ -1.53
VPS4AQ9UN37 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 AP004607.3-201ENST00000530354 3915 ntBASIC5.52□□□□□ -1.53
VPS4AQ9UN37 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 SELENOWP1-201ENST00000322792 252 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 RN7SKP74-201ENST00000362849 309 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 RNA5SP187-201ENST00000384400 119 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 RNA5SP91-201ENST00000390902 119 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AP002784.2-201ENST00000397300 549 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 CHMP1B2P-201ENST00000399581 597 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AL445213.1-201ENST00000412589 747 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AC093155.2-201ENST00000420734 937 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 HMGN2P27-201ENST00000427352 270 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 SUMO2P3-201ENST00000438311 288 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 EIF2S2P2-201ENST00000447161 982 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 GAPDHP14-201ENST00000450472 937 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 MTND2P8-201ENST00000450555 1025 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AL606490.1-201ENST00000452266 765 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 MEMO1P4-201ENST00000453590 386 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AC004129.2-201ENST00000457229 287 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 SNORD11.1-201ENST00000459482 85 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 OR2AO1P-201ENST00000476497 403 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 DUTP7-201ENST00000507982 486 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 MTCYBP19-201ENST00000517463 1124 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 OR10G5P-201ENST00000532733 358 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AL132857.1-201ENST00000555180 708 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 MIR1269B-201ENST00000580405 75 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 FAM106CP-201ENST00000582212 507 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AL160237.3-201ENST00000604114 1013 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 SUMO2P14-201ENST00000604488 293 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 HIRAP1-201ENST00000605318 787 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 NANOGP3-201ENST00000605855 286 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 MIR6809-201ENST00000612189 116 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AC083865.1-201ENST00000636634 831 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 HSPD1P11-201ENST00000508643 1702 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS4AQ9UN37 AC133552.1-201ENST00000569988 4007 ntBASIC5.51□□□□□ -1.53
VPS4AQ9UN37 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
VPS4AQ9UN37 AC007342.5-201ENST00000571340 2142 ntBASIC5.5□□□□□ -1.53
VPS4AQ9UN37 MFSD8-239ENST00000641590 2479 ntBASIC5.5□□□□□ -1.53
VPS4AQ9UN37 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS4AQ9UN37 MFSD8-219ENST00000641228 2559 ntBASIC5.5□□□□□ -1.53
VPS4AQ9UN37 ZNF29P-201ENST00000225587 168 ntBASIC5.5□□□□□ -1.53
VPS4AQ9UN37 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS4AQ9UN37 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS4AQ9UN37 RNU1-150P-201ENST00000362491 162 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms