Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.86□□□□□ -1.63
NDE1Q9NXR1 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.86□□□□□ -1.63
NDE1Q9NXR1 RPL12P11-201ENST00000439970 501 ntBASIC4.86□□□□□ -1.63
NDE1Q9NXR1 AMYP1-201ENST00000440059 1023 ntBASIC4.86□□□□□ -1.63
NDE1Q9NXR1 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.86□□□□□ -1.63
NDE1Q9NXR1 OR52Y1P-201ENST00000452418 828 ntBASIC4.86□□□□□ -1.63
NDE1Q9NXR1 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.86□□□□□ -1.63
NDE1Q9NXR1 AC005008.1-201ENST00000456151 612 ntBASIC4.86□□□□□ -1.63
NDE1Q9NXR1 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC4.86□□□□□ -1.63
NDE1Q9NXR1 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.86□□□□□ -1.63
NDE1Q9NXR1 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
NDE1Q9NXR1 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.86□□□□□ -1.63
NDE1Q9NXR1 AC109481.1-201ENST00000509173 282 ntBASIC4.86□□□□□ -1.63
NDE1Q9NXR1 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.86□□□□□ -1.63
NDE1Q9NXR1 SNORA70.17-201ENST00000516449 133 ntBASIC4.86□□□□□ -1.63
NDE1Q9NXR1 RN7SKP70-201ENST00000516655 271 ntBASIC4.86□□□□□ -1.63
NDE1Q9NXR1 AC116917.1-201ENST00000520558 305 ntBASIC4.86□□□□□ -1.63
NDE1Q9NXR1 KCTD9P6-201ENST00000522306 950 ntBASIC4.86□□□□□ -1.63
NDE1Q9NXR1 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.86□□□□□ -1.63
NDE1Q9NXR1 AC027369.2-201ENST00000528030 440 ntBASIC4.86□□□□□ -1.63
NDE1Q9NXR1 AP003033.2-201ENST00000528901 805 ntBASIC4.86□□□□□ -1.63
NDE1Q9NXR1 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.86□□□□□ -1.63
NDE1Q9NXR1 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.86□□□□□ -1.63
NDE1Q9NXR1 AC107958.1-201ENST00000556576 290 ntBASIC4.86□□□□□ -1.63
NDE1Q9NXR1 MIR3154-201ENST00000577829 84 ntBASIC4.86□□□□□ -1.63
NDE1Q9NXR1 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.86□□□□□ -1.63
NDE1Q9NXR1 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.86□□□□□ -1.63
NDE1Q9NXR1 AC008115.3-201ENST00000614874 549 ntBASIC4.86□□□□□ -1.63
NDE1Q9NXR1 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.86□□□□□ -1.63
NDE1Q9NXR1 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.86□□□□□ -1.63
NDE1Q9NXR1 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
NDE1Q9NXR1 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NDE1Q9NXR1 AC108751.5-201ENST00000492880 1336 ntBASIC4.86□□□□□ -1.63
NDE1Q9NXR1 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.86□□□□□ -1.63
NDE1Q9NXR1 AC106872.5-201ENST00000508856 1416 ntBASIC4.86□□□□□ -1.63
NDE1Q9NXR1 AC090181.3-201ENST00000624777 1514 ntBASIC4.86□□□□□ -1.63
NDE1Q9NXR1 AC120338.1-201ENST00000625074 1541 ntBASIC4.86□□□□□ -1.63
NDE1Q9NXR1 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
NDE1Q9NXR1 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.86□□□□□ -1.63
NDE1Q9NXR1 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
NDE1Q9NXR1 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.86□□□□□ -1.63
NDE1Q9NXR1 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 AL606537.1-201ENST00000607258 2011 ntBASIC4.85□□□□□ -1.63
NDE1Q9NXR1 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 MAPK10-303ENST00000641324 3959 ntBASIC4.85□□□□□ -1.63
NDE1Q9NXR1 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 RNU1-94P-201ENST00000362627 173 ntBASIC4.85□□□□□ -1.63
NDE1Q9NXR1 SNORA73.1-201ENST00000363107 205 ntBASIC4.85□□□□□ -1.63
NDE1Q9NXR1 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 SNORD96B-201ENST00000386148 79 ntBASIC4.85□□□□□ -1.63
NDE1Q9NXR1 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 EIF4HP2-201ENST00000424380 563 ntBASIC4.85□□□□□ -1.63
NDE1Q9NXR1 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 AC098818.1-201ENST00000478593 252 ntBASIC4.85□□□□□ -1.63
NDE1Q9NXR1 RPL23AP37-201ENST00000479658 549 ntBASIC4.85□□□□□ -1.63
NDE1Q9NXR1 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 AC060775.1-201ENST00000518241 520 ntBASIC4.85□□□□□ -1.63
NDE1Q9NXR1 AC104997.1-201ENST00000519761 717 ntBASIC4.85□□□□□ -1.63
NDE1Q9NXR1 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 AC022882.1-201ENST00000532142 501 ntBASIC4.85□□□□□ -1.63
NDE1Q9NXR1 GSTP1P1-201ENST00000548078 319 ntBASIC4.85□□□□□ -1.63
NDE1Q9NXR1 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 AC005014.3-201ENST00000605985 190 ntBASIC4.85□□□□□ -1.63
NDE1Q9NXR1 CU639417.4-201ENST00000623928 207 ntBASIC4.85□□□□□ -1.63
NDE1Q9NXR1 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NDE1Q9NXR1 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NDE1Q9NXR1 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
NDE1Q9NXR1 MIR133B-201ENST00000362210 119 ntBASIC4.84□□□□□ -1.63
NDE1Q9NXR1 RN7SKP104-201ENST00000362605 328 ntBASIC4.84□□□□□ -1.63
NDE1Q9NXR1 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NDE1Q9NXR1 RPL21P108-201ENST00000413857 481 ntBASIC4.84□□□□□ -1.63
NDE1Q9NXR1 CEACAMP8-201ENST00000413902 580 ntBASIC4.84□□□□□ -1.63
NDE1Q9NXR1 AC009237.10-201ENST00000414112 510 ntBASIC4.84□□□□□ -1.63
NDE1Q9NXR1 RPL34P3-201ENST00000421454 338 ntBASIC4.84□□□□□ -1.63
NDE1Q9NXR1 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.84□□□□□ -1.63
NDE1Q9NXR1 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.84□□□□□ -1.63
NDE1Q9NXR1 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.84□□□□□ -1.63
NDE1Q9NXR1 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.84□□□□□ -1.63
NDE1Q9NXR1 AC092162.1-201ENST00000432828 434 ntBASIC4.84□□□□□ -1.63
NDE1Q9NXR1 TXNP5-201ENST00000441043 315 ntBASIC4.84□□□□□ -1.63
NDE1Q9NXR1 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms