Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RPS7P6-201ENST00000485777 579 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.83□□□□□ -1.48
SLC6A4P31645 RPS12P31-201ENST00000491419 398 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 AL136038.1-201ENST00000497246 351 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.83□□□□□ -1.48
SLC6A4P31645 AC010486.3-201ENST00000511602 785 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 Y_RNA.688-201ENST00000516565 95 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.83□□□□□ -1.48
SLC6A4P31645 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SLC6A4P31645 AGGF1P7-201ENST00000562369 913 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.83□□□□□ -1.48
SLC6A4P31645 RN7SL622P-201ENST00000585292 275 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.83□□□□□ -1.48
SLC6A4P31645 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.83□□□□□ -1.48
SLC6A4P31645 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.83□□□□□ -1.48
SLC6A4P31645 AC002069.2-201ENST00000603580 883 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 AC013244.1-201ENST00000604279 193 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 Z94722.1-201ENST00000604328 474 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 HIRAP1-201ENST00000605318 787 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 AC019131.2-201ENST00000609071 870 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.83□□□□□ -1.48
SLC6A4P31645 AL512506.2-201ENST00000624472 458 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.83□□□□□ -1.48
SLC6A4P31645 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
SLC6A4P31645 BX649567.1-201ENST00000642071 1134 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SLC6A4P31645 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SLC6A4P31645 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.83□□□□□ -1.48
SLC6A4P31645 AC004656.1-201ENST00000568479 4951 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.83□□□□□ -1.48
SLC6A4P31645 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.83□□□□□ -1.48
SLC6A4P31645 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.83□□□□□ -1.48
SLC6A4P31645 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SLC6A4P31645 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
SLC6A4P31645 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.83□□□□□ -1.48
SLC6A4P31645 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SLC6A4P31645 MTCO1P18-201ENST00000455518 1419 ntBASIC5.82□□□□□ -1.48
SLC6A4P31645 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.82□□□□□ -1.48
SLC6A4P31645 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.82□□□□□ -1.48
SLC6A4P31645 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
SLC6A4P31645 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.82□□□□□ -1.48
SLC6A4P31645 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SLC6A4P31645 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SLC6A4P31645 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.82□□□□□ -1.48
SLC6A4P31645 GAPDHP24-201ENST00000328713 983 ntBASIC5.82□□□□□ -1.48
SLC6A4P31645 RNU4-31P-201ENST00000384211 141 ntBASIC5.82□□□□□ -1.48
SLC6A4P31645 MIR143-201ENST00000385300 106 ntBASIC5.82□□□□□ -1.48
SLC6A4P31645 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SLC6A4P31645 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.82□□□□□ -1.48
SLC6A4P31645 AL034403.1-201ENST00000399414 885 ntBASIC5.82□□□□□ -1.48
SLC6A4P31645 AL136310.1-201ENST00000404926 654 ntBASIC5.82□□□□□ -1.48
SLC6A4P31645 RPA2P2-201ENST00000419698 796 ntBASIC5.82□□□□□ -1.48
SLC6A4P31645 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.82□□□□□ -1.48
SLC6A4P31645 AL121776.1-201ENST00000429337 372 ntBASIC5.82□□□□□ -1.48
SLC6A4P31645 HSFY3P-201ENST00000444242 1191 ntBASIC5.82□□□□□ -1.48
SLC6A4P31645 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.82□□□□□ -1.48
SLC6A4P31645 AL450996.1-201ENST00000445574 1202 ntBASIC5.82□□□□□ -1.48
SLC6A4P31645 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SLC6A4P31645 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.82□□□□□ -1.48
SLC6A4P31645 RPS6P2-201ENST00000454208 705 ntBASIC5.82□□□□□ -1.48
SLC6A4P31645 RPL7P45-201ENST00000455851 743 ntBASIC5.82□□□□□ -1.48
SLC6A4P31645 RPS20P4-201ENST00000461659 355 ntBASIC5.82□□□□□ -1.48
SLC6A4P31645 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.82□□□□□ -1.48
SLC6A4P31645 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.82□□□□□ -1.48
SLC6A4P31645 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.82□□□□□ -1.48
SLC6A4P31645 MTCO3P28-201ENST00000513351 515 ntBASIC5.82□□□□□ -1.48
SLC6A4P31645 SNORA3.4-201ENST00000515969 96 ntBASIC5.82□□□□□ -1.48
SLC6A4P31645 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.82□□□□□ -1.48
SLC6A4P31645 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.82□□□□□ -1.48
SLC6A4P31645 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SLC6A4P31645 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.82□□□□□ -1.48
SLC6A4P31645 AC009094.1-201ENST00000564443 426 ntBASIC5.82□□□□□ -1.48
SLC6A4P31645 MRPS21P7-201ENST00000566937 238 ntBASIC5.82□□□□□ -1.48
SLC6A4P31645 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.82□□□□□ -1.48
SLC6A4P31645 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.82□□□□□ -1.48
SLC6A4P31645 AC012254.4-201ENST00000588843 273 ntBASIC5.82□□□□□ -1.48
SLC6A4P31645 AC022467.1-201ENST00000614738 749 ntBASIC5.82□□□□□ -1.48
SLC6A4P31645 AC241377.1-201ENST00000619797 406 ntBASIC5.82□□□□□ -1.48
SLC6A4P31645 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SLC6A4P31645 AC013470.4-201ENST00000619978 986 ntBASIC5.82□□□□□ -1.48
SLC6A4P31645 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC5.82□□□□□ -1.48
SLC6A4P31645 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.82□□□□□ -1.48
SLC6A4P31645 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.82□□□□□ -1.48
SLC6A4P31645 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SLC6A4P31645 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SLC6A4P31645 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SLC6A4P31645 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SLC6A4P31645 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SLC6A4P31645 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.82□□□□□ -1.48
SLC6A4P31645 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SLC6A4P31645 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SLC6A4P31645 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
SLC6A4P31645 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SLC6A4P31645 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SLC6A4P31645 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
SLC6A4P31645 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SLC6A4P31645 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SLC6A4P31645 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.82□□□□□ -1.48
SLC6A4P31645 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SLC6A4P31645 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms