Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 OR4A45P-201ENST00000529954 901 ntBASIC6.61□□□□□ -1.35
PCDH1Q08174 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDH1Q08174 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDH1Q08174 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDH1Q08174 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.61□□□□□ -1.35
PCDH1Q08174 AC090616.5-202ENST00000582111 297 ntBASIC6.61□□□□□ -1.35
PCDH1Q08174 AC044792.1-201ENST00000593294 196 ntBASIC6.61□□□□□ -1.35
PCDH1Q08174 AC063977.5-201ENST00000601044 974 ntBASIC6.61□□□□□ -1.35
PCDH1Q08174 AL596327.1-201ENST00000603629 213 ntBASIC6.61□□□□□ -1.35
PCDH1Q08174 AL049634.3-201ENST00000604968 457 ntBASIC6.61□□□□□ -1.35
PCDH1Q08174 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.61□□□□□ -1.35
PCDH1Q08174 AL592295.2-201ENST00000612578 206 ntBASIC6.61□□□□□ -1.35
PCDH1Q08174 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDH1Q08174 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDH1Q08174 MIR6863-201ENST00000636112 90 ntBASIC6.61□□□□□ -1.35
PCDH1Q08174 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDH1Q08174 AC105114.1-201ENST00000624795 1862 ntBASIC6.61□□□□□ -1.35
PCDH1Q08174 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDH1Q08174 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDH1Q08174 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDH1Q08174 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.61□□□□□ -1.35
PCDH1Q08174 AC078880.4-201ENST00000617627 1749 ntBASIC6.61□□□□□ -1.35
PCDH1Q08174 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PCDH1Q08174 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PCDH1Q08174 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDH1Q08174 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDH1Q08174 CASC19-260ENST00000641828 2001 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH1Q08174 AC093278.2-201ENST00000564956 2485 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC6.6□□□□□ -1.35
PCDH1Q08174 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH1Q08174 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH1Q08174 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH1Q08174 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH1Q08174 AC107982.1-201ENST00000507171 1300 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
PCDH1Q08174 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.6□□□□□ -1.35
PCDH1Q08174 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH1Q08174 OR10D1P-201ENST00000355343 936 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 RNA5SP355-201ENST00000365317 135 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH1Q08174 RPL23AP29-201ENST00000397284 453 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH1Q08174 AL161742.1-201ENST00000418154 584 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 EIF4A1P5-201ENST00000428062 1095 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 PHB2P1-201ENST00000434943 890 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.6□□□□□ -1.35
PCDH1Q08174 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.6□□□□□ -1.35
PCDH1Q08174 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.6□□□□□ -1.35
PCDH1Q08174 RPL7AP71-201ENST00000451120 739 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.6□□□□□ -1.35
PCDH1Q08174 OR7E7P-201ENST00000455678 1012 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 CBX5P1-201ENST00000468470 561 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 RPS3AP49-201ENST00000472161 790 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 TUBBP11-201ENST00000472255 252 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
PCDH1Q08174 AC025271.1-201ENST00000485045 429 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.6□□□□□ -1.35
PCDH1Q08174 MTCYBP18-201ENST00000501056 747 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 AC008868.1-201ENST00000509786 737 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 MTND3P22-201ENST00000510932 243 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC6.6□□□□□ -1.35
PCDH1Q08174 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.6□□□□□ -1.35
PCDH1Q08174 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC6.6□□□□□ -1.35
PCDH1Q08174 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.6□□□□□ -1.35
PCDH1Q08174 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.6□□□□□ -1.35
PCDH1Q08174 OR5AQ1P-201ENST00000527596 927 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
PCDH1Q08174 OR8L1P-201ENST00000534005 955 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
PCDH1Q08174 NF1P12-201ENST00000549593 583 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 CENPUP2-201ENST00000555897 1186 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 MIR548Y-201ENST00000582739 110 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 MIR5010-201ENST00000582846 120 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 MIR5682-201ENST00000584864 76 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.6□□□□□ -1.35
PCDH1Q08174 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH1Q08174 AC024085.1-201ENST00000604299 432 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 AC023206.1-201ENST00000605824 298 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 AC008536.2-201ENST00000607284 349 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 UBE2Q2P2-203ENST00000613592 761 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH1Q08174 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 AC007347.2-201ENST00000623044 180 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 AC009033.1-201ENST00000624279 431 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 AC114546.4-201ENST00000624413 369 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 SNORA16A-202ENST00000628458 135 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 AC243725.1-201ENST00000637164 436 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 MKKS-204ENST00000639674 192 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.6□□□□□ -1.35
PCDH1Q08174 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH1Q08174 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH1Q08174 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
PCDH1Q08174 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
PCDH1Q08174 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDH1Q08174 WBP11P1-201ENST00000562560 1931 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.6□□□□□ -1.35
PCDH1Q08174 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.6□□□□□ -1.35
PCDH1Q08174 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms