Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SHC1P29353 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SHC1P29353 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
SHC1P29353 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.68□□□□□ -1.66
SHC1P29353 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.68□□□□□ -1.66
SHC1P29353 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
SHC1P29353 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SHC1P29353 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHC1P29353 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.67□□□□□ -1.66
SHC1P29353 PROS2P-201ENST00000474651 1951 ntBASIC4.67□□□□□ -1.66
SHC1P29353 AC083899.2-201ENST00000423285 1376 ntBASIC4.67□□□□□ -1.66
SHC1P29353 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHC1P29353 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHC1P29353 AC063976.2-201ENST00000425667 3556 ntBASIC4.67□□□□□ -1.66
SHC1P29353 AL022322.2-201ENST00000624072 20397 ntBASIC4.67□□□□□ -1.66
SHC1P29353 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.67□□□□□ -1.66
SHC1P29353 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHC1P29353 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHC1P29353 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHC1P29353 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SHC1P29353 U8.4-201ENST00000363626 134 ntBASIC4.67□□□□□ -1.66
SHC1P29353 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHC1P29353 MIR1182-201ENST00000408363 97 ntBASIC4.67□□□□□ -1.66
SHC1P29353 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.67□□□□□ -1.66
SHC1P29353 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.67□□□□□ -1.66
SHC1P29353 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.67□□□□□ -1.66
SHC1P29353 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.67□□□□□ -1.66
SHC1P29353 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.67□□□□□ -1.66
SHC1P29353 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.67□□□□□ -1.66
SHC1P29353 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.67□□□□□ -1.66
SHC1P29353 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.67□□□□□ -1.66
SHC1P29353 RPS29P10-201ENST00000439197 166 ntBASIC4.67□□□□□ -1.66
SHC1P29353 MTCO3P43-201ENST00000440974 771 ntBASIC4.67□□□□□ -1.66
SHC1P29353 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.67□□□□□ -1.66
SHC1P29353 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.67□□□□□ -1.66
SHC1P29353 AL163193.1-201ENST00000444895 788 ntBASIC4.67□□□□□ -1.66
SHC1P29353 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.67□□□□□ -1.66
SHC1P29353 AC092647.2-201ENST00000452998 253 ntBASIC4.67□□□□□ -1.66
SHC1P29353 DNAJB5P1-201ENST00000454004 806 ntBASIC4.67□□□□□ -1.66
SHC1P29353 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.67□□□□□ -1.66
SHC1P29353 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.67□□□□□ -1.66
SHC1P29353 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.67□□□□□ -1.66
SHC1P29353 RNU6-943P-201ENST00000516960 98 ntBASIC4.67□□□□□ -1.66
SHC1P29353 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.67□□□□□ -1.66
SHC1P29353 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHC1P29353 AC234775.3-201ENST00000564612 656 ntBASIC4.67□□□□□ -1.66
SHC1P29353 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHC1P29353 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.67□□□□□ -1.66
SHC1P29353 AP005262.1-201ENST00000582646 997 ntBASIC4.67□□□□□ -1.66
SHC1P29353 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.67□□□□□ -1.66
SHC1P29353 AC006272.2-201ENST00000594725 163 ntBASIC4.67□□□□□ -1.66
SHC1P29353 BNIP3P35-201ENST00000604530 490 ntBASIC4.67□□□□□ -1.66
SHC1P29353 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.67□□□□□ -1.66
SHC1P29353 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.67□□□□□ -1.66
SHC1P29353 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.67□□□□□ -1.66
SHC1P29353 SDR42E1P1-201ENST00000611327 477 ntBASIC4.67□□□□□ -1.66
SHC1P29353 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHC1P29353 AC037198.3-201ENST00000616754 526 ntBASIC4.67□□□□□ -1.66
SHC1P29353 AC118658.2-201ENST00000618697 459 ntBASIC4.67□□□□□ -1.66
SHC1P29353 AP000648.2-201ENST00000624182 404 ntBASIC4.67□□□□□ -1.66
SHC1P29353 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.67□□□□□ -1.66
SHC1P29353 AL590396.2-201ENST00000636511 1041 ntBASIC4.67□□□□□ -1.66
SHC1P29353 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
SHC1P29353 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
SHC1P29353 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHC1P29353 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHC1P29353 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHC1P29353 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHC1P29353 AC006210.2-201ENST00000367074 1545 ntBASIC4.67□□□□□ -1.66
SHC1P29353 PANDAR-201ENST00000629595 1506 ntBASIC4.67□□□□□ -1.66
SHC1P29353 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.66□□□□□ -1.66
SHC1P29353 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SHC1P29353 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHC1P29353 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.66□□□□□ -1.66
SHC1P29353 AC024341.1-201ENST00000526444 1552 ntBASIC4.66□□□□□ -1.66
SHC1P29353 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SHC1P29353 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SHC1P29353 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.66□□□□□ -1.66
SHC1P29353 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHC1P29353 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHC1P29353 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.66□□□□□ -1.66
SHC1P29353 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.66□□□□□ -1.66
SHC1P29353 SNORA17.1-201ENST00000362945 126 ntBASIC4.66□□□□□ -1.66
SHC1P29353 Y_RNA.110-201ENST00000363220 99 ntBASIC4.66□□□□□ -1.66
SHC1P29353 OR8V1P-201ENST00000395193 873 ntBASIC4.66□□□□□ -1.66
SHC1P29353 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SHC1P29353 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SHC1P29353 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SHC1P29353 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.66□□□□□ -1.66
SHC1P29353 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.66□□□□□ -1.66
SHC1P29353 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SHC1P29353 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.66□□□□□ -1.66
SHC1P29353 MTND6P5-201ENST00000448266 512 ntBASIC4.66□□□□□ -1.66
SHC1P29353 RPS4XP12-201ENST00000461747 709 ntBASIC4.66□□□□□ -1.66
SHC1P29353 RN7SL515P-201ENST00000463999 297 ntBASIC4.66□□□□□ -1.66
SHC1P29353 AC020779.1-201ENST00000478757 796 ntBASIC4.66□□□□□ -1.66
SHC1P29353 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.66□□□□□ -1.66
SHC1P29353 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SHC1P29353 AC004815.1-201ENST00000484185 331 ntBASIC4.66□□□□□ -1.66
SHC1P29353 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms