Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS4BO75351 U6.112-201ENST00000384129 70 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 MIR105-2-201ENST00000385083 81 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 MIR937-201ENST00000401271 86 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 AL021331.1-201ENST00000402817 582 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 MIR1178-201ENST00000408396 91 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 AC010385.1-201ENST00000412374 256 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.72□□□□□ -1.49
VPS4BO75351 RNGTTP1-201ENST00000420965 728 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS4BO75351 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS4BO75351 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS4BO75351 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS4BO75351 Z84478.1-201ENST00000438230 1219 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 PTGES3P1-201ENST00000439531 483 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 AC073052.1-201ENST00000440417 714 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS4BO75351 AC002553.3-201ENST00000453002 341 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS4BO75351 RPL38P3-201ENST00000484463 213 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS4BO75351 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS4BO75351 AC114781.3-201ENST00000512083 142 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 MIR2117-201ENST00000516780 80 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.72□□□□□ -1.49
VPS4BO75351 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS4BO75351 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS4BO75351 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS4BO75351 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS4BO75351 AC091078.2-201ENST00000557145 559 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS4BO75351 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS4BO75351 AC008088.1-201ENST00000580993 280 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 MIR3176-201ENST00000582210 90 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS4BO75351 OR7E18P-201ENST00000592589 702 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.72□□□□□ -1.49
VPS4BO75351 AC011374.2-201ENST00000607135 526 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 AC064807.4-201ENST00000607201 407 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 RN7SL787P-201ENST00000613000 284 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 AL512652.1-201ENST00000619006 500 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 AC123767.1-202ENST00000620407 817 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
VPS4BO75351 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS4BO75351 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS4BO75351 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS4BO75351 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
VPS4BO75351 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS4BO75351 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
VPS4BO75351 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
VPS4BO75351 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS4BO75351 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
VPS4BO75351 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS4BO75351 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
VPS4BO75351 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
VPS4BO75351 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
VPS4BO75351 AL034546.1-201ENST00000623740 3693 ntBASIC5.71□□□□□ -1.49
VPS4BO75351 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.71□□□□□ -1.49
VPS4BO75351 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
VPS4BO75351 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS4BO75351 RBMY1HP-201ENST00000382759 1389 ntBASIC5.71□□□□□ -1.5
VPS4BO75351 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS4BO75351 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.5
VPS4BO75351 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS4BO75351 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS4BO75351 SNORA21-201ENST00000362423 132 ntBASIC5.71□□□□□ -1.5
VPS4BO75351 RNU1-134P-201ENST00000362935 165 ntBASIC5.71□□□□□ -1.5
VPS4BO75351 ATP5HP3-201ENST00000396994 486 ntBASIC5.71□□□□□ -1.5
VPS4BO75351 ATP5F1P2-201ENST00000398143 760 ntBASIC5.71□□□□□ -1.5
VPS4BO75351 RPL7P27-201ENST00000403775 720 ntBASIC5.71□□□□□ -1.5
VPS4BO75351 RN7SKP293-201ENST00000411389 296 ntBASIC5.71□□□□□ -1.5
VPS4BO75351 AC010099.3-201ENST00000423896 409 ntBASIC5.71□□□□□ -1.5
VPS4BO75351 VN1R21P-201ENST00000426703 765 ntBASIC5.71□□□□□ -1.5
VPS4BO75351 AL035458.1-201ENST00000433096 585 ntBASIC5.71□□□□□ -1.5
VPS4BO75351 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS4BO75351 AL163193.1-201ENST00000444895 788 ntBASIC5.71□□□□□ -1.5
VPS4BO75351 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VPS4BO75351 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS4BO75351 Z99714.1-201ENST00000450463 807 ntBASIC5.71□□□□□ -1.5
VPS4BO75351 AP006222.1-205ENST00000450734 457 ntBASIC5.71□□□□□ -1.5
VPS4BO75351 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS4BO75351 AL445665.1-202ENST00000452436 324 ntBASIC5.71□□□□□ -1.5
VPS4BO75351 CALM1P2-201ENST00000452941 448 ntBASIC5.71□□□□□ -1.5
VPS4BO75351 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS4BO75351 PTGES3P5-201ENST00000455109 434 ntBASIC5.71□□□□□ -1.5
VPS4BO75351 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS4BO75351 RPS23P1-201ENST00000491662 432 ntBASIC5.71□□□□□ -1.5
VPS4BO75351 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VPS4BO75351 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.71□□□□□ -1.5
VPS4BO75351 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS4BO75351 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS4BO75351 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS4BO75351 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS4BO75351 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS4BO75351 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS4BO75351 AL049870.4-201ENST00000555741 486 ntBASIC5.71□□□□□ -1.5
VPS4BO75351 MTND4P33-201ENST00000556706 766 ntBASIC5.71□□□□□ -1.5
VPS4BO75351 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms