Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 MIR375-201ENST00000362103 64 ntBASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 RNU1-150P-201ENST00000362491 162 ntBASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 MT-TP-201ENST00000387461 68 ntBASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 LAP3P1-201ENST00000403648 294 ntBASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 BX323845.3-201ENST00000428215 527 ntBASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 GAPDHP34-201ENST00000432112 823 ntBASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 AC073109.1-201ENST00000445066 978 ntBASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 BUD31P2-201ENST00000449374 300 ntBASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 KF459542.1-201ENST00000450908 553 ntBASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 CALM1P2-201ENST00000452941 448 ntBASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 AC007386.1-201ENST00000455212 582 ntBASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 RPS23P6-201ENST00000466136 431 ntBASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 AC058823.1-201ENST00000485315 474 ntBASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 OR5H7P-201ENST00000514084 930 ntBASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 AL845552.1-201ENST00000556820 323 ntBASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 NDUFB4P11-201ENST00000560510 395 ntBASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 AGGF1P9-201ENST00000561884 913 ntBASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 AC015802.2-201ENST00000589690 189 ntBASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 AC011500.1-201ENST00000601963 469 ntBASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 AC034236.3-201ENST00000605999 461 ntBASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 AC097505.1-201ENST00000610199 565 ntBASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 AC108359.1-201ENST00000616451 1211 ntBASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 AC007342.7-201ENST00000624610 2337 ntBASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 RN7SKP184-201ENST00000362348 333 ntBASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 RNA5SP477-201ENST00000362639 119 ntBASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 RNU6-819P-201ENST00000364116 107 ntBASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 RN7SKP16-201ENST00000410180 299 ntBASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 ATG4AP1-201ENST00000416893 538 ntBASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 AL139148.1-201ENST00000427122 680 ntBASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 AC093716.1-201ENST00000435923 377 ntBASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 AL512637.1-201ENST00000439523 1231 ntBASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 TXNP2-201ENST00000443918 295 ntBASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 AC105399.1-202ENST00000447303 205 ntBASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 FGF7P3-201ENST00000454645 303 ntBASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 CEACAMP11-201ENST00000455211 583 ntBASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 AC112206.1-201ENST00000468416 477 ntBASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 RN7SL568P-201ENST00000493069 298 ntBASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 AC106822.1-201ENST00000502647 526 ntBASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 AC018797.1-201ENST00000510791 255 ntBASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 HSD3BP3-201ENST00000514706 994 ntBASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 SNORA43.3-201ENST00000517240 103 ntBASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 AC027308.1-201ENST00000517993 110 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms