Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 OR5D15P-201ENST00000531671 942 ntBASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 AL445528.2-201ENST00000620582 470 ntBASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 RNU6-368P-201ENST00000620928 107 ntBASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 RNU6-538P-201ENST00000622329 107 ntBASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 AC138965.3-201ENST00000623875 498 ntBASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
NPIPA1Q9UND3 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 OR9G4-201ENST00000302957 984 ntBASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 RNA5SP443-201ENST00000363083 132 ntBASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 AL109941.1-201ENST00000401925 229 ntBASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 RN7SKP216-201ENST00000411050 312 ntBASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 SETP15-201ENST00000412724 337 ntBASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 RPS26P13-201ENST00000419030 330 ntBASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 Z80107.2-201ENST00000445127 392 ntBASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 AC058823.1-201ENST00000485315 474 ntBASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 RPS12P31-201ENST00000491419 398 ntBASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 CDH12P4-201ENST00000517835 295 ntBASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 CDH12P3-201ENST00000517935 295 ntBASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 CDH12P1-201ENST00000518435 295 ntBASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 AC005000.1-201ENST00000536192 288 ntBASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 DPRXP4-201ENST00000578053 568 ntBASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 AC011840.5-201ENST00000582125 771 ntBASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 AC239803.2-201ENST00000610161 430 ntBASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 EIF3FP1-201ENST00000613970 806 ntBASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 AC073342.3-201ENST00000624211 193 ntBASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
NPIPA1Q9UND3 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 SOCS5P3-201ENST00000425115 1576 ntBASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 RNU6-386P-201ENST00000362650 107 ntBASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 RN7SKP115-201ENST00000363177 317 ntBASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 AC124944.2-201ENST00000429866 1242 ntBASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 AC092647.2-201ENST00000452998 253 ntBASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 C1DP3-201ENST00000455013 423 ntBASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 AC105918.1-201ENST00000474399 838 ntBASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 OR11I1P-201ENST00000486033 954 ntBASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms