Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM3Q53GG5 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 MT-RNR2-201ENST00000387347 1559 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 MFSD8-239ENST00000641590 2479 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 MIR375-201ENST00000362103 64 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 AC013410.2-201ENST00000422627 201 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 OR10T1P-201ENST00000424327 947 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 AL590762.4-201ENST00000425885 253 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 RPS12P17-201ENST00000438591 377 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 AL158053.1-201ENST00000441503 453 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 AC015983.1-201ENST00000441577 373 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 FHP1-201ENST00000442741 703 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 AC023271.1-201ENST00000445936 1090 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 EIF2S2P5-201ENST00000457635 968 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 SNORD125-201ENST00000459538 96 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 AC090602.1-201ENST00000469695 252 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 CBX1P5-201ENST00000475330 559 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 BTG4P1-201ENST00000510421 183 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 GAPDHP62-201ENST00000515313 990 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 SNORA76.2-201ENST00000517095 137 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 OR5D15P-201ENST00000531671 942 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 OR4A43P-201ENST00000532938 908 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 AC233266.2-201ENST00000567067 528 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 RNF138P2-201ENST00000603490 592 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 AC004775.1-201ENST00000607389 753 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 AC090510.2-201ENST00000617465 629 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 AL163051.2-201ENST00000618976 735 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 AC068870.2-201ENST00000620635 389 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 AP001784.1-201ENST00000624107 428 ntBASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM3Q53GG5 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AL450326.2-201ENST00000421913 1962 ntBASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AC023421.1-201ENST00000590535 1785 ntBASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AL034403.1-201ENST00000399414 885 ntBASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 RPL26P37-201ENST00000411983 438 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms