Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL2A1P02458 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
COL2A1P02458 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL2A1P02458 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.76□□□□□ -1.49
COL2A1P02458 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL2A1P02458 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.76□□□□□ -1.49
COL2A1P02458 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL2A1P02458 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL2A1P02458 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL2A1P02458 SNORA57.1-201ENST00000391227 145 ntBASIC5.76□□□□□ -1.49
COL2A1P02458 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL2A1P02458 AL049697.2-201ENST00000403708 294 ntBASIC5.76□□□□□ -1.49
COL2A1P02458 OR2B7P-201ENST00000429302 934 ntBASIC5.76□□□□□ -1.49
COL2A1P02458 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.76□□□□□ -1.49
COL2A1P02458 AC010326.1-201ENST00000462726 602 ntBASIC5.76□□□□□ -1.49
COL2A1P02458 RPL12P20-201ENST00000475538 479 ntBASIC5.76□□□□□ -1.49
COL2A1P02458 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.76□□□□□ -1.49
COL2A1P02458 AC026402.1-201ENST00000513642 170 ntBASIC5.76□□□□□ -1.49
COL2A1P02458 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.76□□□□□ -1.49
COL2A1P02458 AC009643.1-201ENST00000532030 391 ntBASIC5.76□□□□□ -1.49
COL2A1P02458 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.76□□□□□ -1.49
COL2A1P02458 AL445423.1-201ENST00000609941 536 ntBASIC5.76□□□□□ -1.49
COL2A1P02458 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.76□□□□□ -1.49
COL2A1P02458 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.76□□□□□ -1.49
COL2A1P02458 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL2A1P02458 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL2A1P02458 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL2A1P02458 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.76□□□□□ -1.49
COL2A1P02458 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.76□□□□□ -1.49
COL2A1P02458 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.76□□□□□ -1.49
COL2A1P02458 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
COL2A1P02458 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL2A1P02458 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.75□□□□□ -1.49
COL2A1P02458 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.75□□□□□ -1.49
COL2A1P02458 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.75□□□□□ -1.49
COL2A1P02458 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL2A1P02458 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL2A1P02458 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL2A1P02458 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL2A1P02458 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
COL2A1P02458 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL2A1P02458 RNA5SP515-201ENST00000364570 118 ntBASIC5.75□□□□□ -1.49
COL2A1P02458 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.75□□□□□ -1.49
COL2A1P02458 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.75□□□□□ -1.49
COL2A1P02458 AL035696.2-201ENST00000407941 709 ntBASIC5.75□□□□□ -1.49
COL2A1P02458 OR51B3P-201ENST00000412287 913 ntBASIC5.75□□□□□ -1.49
COL2A1P02458 COX5BP7-201ENST00000414780 274 ntBASIC5.75□□□□□ -1.49
COL2A1P02458 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.75□□□□□ -1.49
COL2A1P02458 LINC00993-201ENST00000420453 540 ntBASIC5.75□□□□□ -1.49
COL2A1P02458 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.75□□□□□ -1.49
COL2A1P02458 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.75□□□□□ -1.49
COL2A1P02458 RPL21P129-201ENST00000491732 478 ntBASIC5.75□□□□□ -1.49
COL2A1P02458 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.75□□□□□ -1.49
COL2A1P02458 AL049839.1-201ENST00000556151 657 ntBASIC5.75□□□□□ -1.49
COL2A1P02458 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
COL2A1P02458 MIR5699-201ENST00000578903 90 ntBASIC5.75□□□□□ -1.49
COL2A1P02458 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.75□□□□□ -1.49
COL2A1P02458 AL359757.1-201ENST00000623176 255 ntBASIC5.75□□□□□ -1.49
COL2A1P02458 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.75□□□□□ -1.49
COL2A1P02458 OR52H1-202ENST00000641796 1061 ntBASIC5.75□□□□□ -1.49
COL2A1P02458 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL2A1P02458 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL2A1P02458 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL2A1P02458 DNM1P47-203ENST00000571780 12667 ntBASIC5.75□□□□□ -1.49
COL2A1P02458 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL2A1P02458 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL2A1P02458 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL2A1P02458 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.74□□□□□ -1.49
COL2A1P02458 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL2A1P02458 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL2A1P02458 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL2A1P02458 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL2A1P02458 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL2A1P02458 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
COL2A1P02458 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL2A1P02458 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL2A1P02458 OR4K15-201ENST00000305051 1216 ntBASIC5.74□□□□□ -1.49
COL2A1P02458 RN7SKP227-201ENST00000364445 330 ntBASIC5.74□□□□□ -1.49
COL2A1P02458 RNA5SP397-201ENST00000391323 118 ntBASIC5.74□□□□□ -1.49
COL2A1P02458 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
COL2A1P02458 AC234779.1-201ENST00000425910 285 ntBASIC5.74□□□□□ -1.49
COL2A1P02458 AL136231.1-201ENST00000429407 730 ntBASIC5.74□□□□□ -1.49
COL2A1P02458 OR11I1P-201ENST00000486033 954 ntBASIC5.74□□□□□ -1.49
COL2A1P02458 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL2A1P02458 RNU2-30P-201ENST00000516209 141 ntBASIC5.74□□□□□ -1.49
COL2A1P02458 Y_RNA.719-201ENST00000517156 106 ntBASIC5.74□□□□□ -1.49
COL2A1P02458 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.74□□□□□ -1.49
COL2A1P02458 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.74□□□□□ -1.49
COL2A1P02458 AC026688.1-201ENST00000520639 1168 ntBASIC5.74□□□□□ -1.49
COL2A1P02458 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL2A1P02458 DPPA3P2-201ENST00000553589 478 ntBASIC5.74□□□□□ -1.49
COL2A1P02458 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.74□□□□□ -1.49
COL2A1P02458 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.74□□□□□ -1.49
COL2A1P02458 AC022726.1-201ENST00000587475 207 ntBASIC5.74□□□□□ -1.49
COL2A1P02458 AC092653.1-201ENST00000608509 531 ntBASIC5.74□□□□□ -1.49
COL2A1P02458 FAM27B-201ENST00000610601 213 ntBASIC5.74□□□□□ -1.49
COL2A1P02458 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL2A1P02458 AC021106.3-201ENST00000623925 531 ntBASIC5.74□□□□□ -1.49
COL2A1P02458 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
COL2A1P02458 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms