Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AL356387.2-201ENST00000422272 243 ntBASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 RN7SL98P-201ENST00000462271 300 ntBASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 AL450472.3-201ENST00000615578 367 ntBASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 AC079097.1-201ENST00000512187 1399 ntBASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 RNA5SP119-201ENST00000362715 117 ntBASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 YY1P1-201ENST00000427625 668 ntBASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 RPL19P16-201ENST00000433839 588 ntBASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 AC023632.4-201ENST00000517783 191 ntBASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 AC079064.1-201ENST00000528365 362 ntBASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 AC024023.1-201ENST00000624530 922 ntBASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.03□□□□□ -1.76
CSMD1Q96PZ7 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC4.03□□□□□ -1.77
CSMD1Q96PZ7 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 RNU6-1279P-201ENST00000383917 103 ntBASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 TCEA1P3-201ENST00000443005 880 ntBASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 AL157884.3-201ENST00000448273 1184 ntBASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 AC084824.2-201ENST00000548906 345 ntBASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 AL133338.2-201ENST00000604292 736 ntBASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 SNORA70.9-201ENST00000384370 135 ntBASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 RPL11P3-201ENST00000395256 523 ntBASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 AC114755.2-201ENST00000413520 361 ntBASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 AC069157.1-201ENST00000421749 137 ntBASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 NDUFB4P8-201ENST00000435351 367 ntBASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 MIR6875-201ENST00000617506 72 ntBASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 KRR1P1-201ENST00000419430 803 ntBASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms