Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCL20P78556 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCL20P78556 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.81□□□□□ -1.8
CCL20P78556 TLK1P1-201ENST00000456760 2440 ntBASIC3.81□□□□□ -1.8
CCL20P78556 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.81□□□□□ -1.8
CCL20P78556 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCL20P78556 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCL20P78556 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCL20P78556 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.8□□□□□ -1.8
CCL20P78556 MTCO1P22-201ENST00000604619 1360 ntBASIC3.8□□□□□ -1.8
CCL20P78556 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC3.8□□□□□ -1.8
CCL20P78556 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CCL20P78556 MIR448-201ENST00000362131 111 ntBASIC3.8□□□□□ -1.8
CCL20P78556 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCL20P78556 RN7SKP167-201ENST00000411047 285 ntBASIC3.8□□□□□ -1.8
CCL20P78556 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC3.8□□□□□ -1.8
CCL20P78556 Z74021.1-201ENST00000423610 407 ntBASIC3.8□□□□□ -1.8
CCL20P78556 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC3.8□□□□□ -1.8
CCL20P78556 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC3.8□□□□□ -1.8
CCL20P78556 RPL7P33-201ENST00000444159 742 ntBASIC3.8□□□□□ -1.8
CCL20P78556 AL591363.1-201ENST00000450091 483 ntBASIC3.8□□□□□ -1.8
CCL20P78556 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC3.8□□□□□ -1.8
CCL20P78556 AC019084.1-201ENST00000457337 432 ntBASIC3.8□□□□□ -1.8
CCL20P78556 RPS26P28-201ENST00000470806 348 ntBASIC3.8□□□□□ -1.8
CCL20P78556 RPL7AP10-201ENST00000481016 791 ntBASIC3.8□□□□□ -1.8
CCL20P78556 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC3.8□□□□□ -1.8
CCL20P78556 AC018797.1-201ENST00000510791 255 ntBASIC3.8□□□□□ -1.8
CCL20P78556 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC3.8□□□□□ -1.8
CCL20P78556 Y_RNA.719-201ENST00000517156 106 ntBASIC3.8□□□□□ -1.8
CCL20P78556 AC113191.1-201ENST00000517759 403 ntBASIC3.8□□□□□ -1.8
CCL20P78556 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC3.8□□□□□ -1.8
CCL20P78556 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC3.8□□□□□ -1.8
CCL20P78556 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC3.8□□□□□ -1.8
CCL20P78556 AC027369.2-201ENST00000528030 440 ntBASIC3.8□□□□□ -1.8
CCL20P78556 AC100770.1-201ENST00000532310 322 ntBASIC3.8□□□□□ -1.8
CCL20P78556 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC3.8□□□□□ -1.8
CCL20P78556 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC3.8□□□□□ -1.8
CCL20P78556 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.8□□□□□ -1.8
CCL20P78556 FKBP1BP1-201ENST00000553366 325 ntBASIC3.8□□□□□ -1.8
CCL20P78556 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.8□□□□□ -1.8
CCL20P78556 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.8□□□□□ -1.8
CCL20P78556 HMGN1P26-201ENST00000558737 303 ntBASIC3.8□□□□□ -1.8
CCL20P78556 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCL20P78556 AC015912.2-201ENST00000571053 181 ntBASIC3.8□□□□□ -1.8
CCL20P78556 AL121834.1-201ENST00000572284 509 ntBASIC3.8□□□□□ -1.8
CCL20P78556 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC3.8□□□□□ -1.8
CCL20P78556 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.8□□□□□ -1.8
CCL20P78556 AC087783.2-201ENST00000605070 562 ntBASIC3.8□□□□□ -1.8
CCL20P78556 MIR6883-201ENST00000614952 78 ntBASIC3.8□□□□□ -1.8
CCL20P78556 MIR6736-201ENST00000616799 59 ntBASIC3.8□□□□□ -1.8
CCL20P78556 AC007683.2-201ENST00000624681 714 ntBASIC3.8□□□□□ -1.8
CCL20P78556 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC3.8□□□□□ -1.8
CCL20P78556 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC3.8□□□□□ -1.8
CCL20P78556 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCL20P78556 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCL20P78556 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCL20P78556 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCL20P78556 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCL20P78556 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCL20P78556 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCL20P78556 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.79□□□□□ -1.8
CCL20P78556 OR56B2P-201ENST00000317102 954 ntBASIC3.79□□□□□ -1.8
CCL20P78556 RNA5SP335-201ENST00000363817 110 ntBASIC3.79□□□□□ -1.8
CCL20P78556 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCL20P78556 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCL20P78556 MIR921-201ENST00000401133 56 ntBASIC3.79□□□□□ -1.8
CCL20P78556 AC233289.1-201ENST00000403700 508 ntBASIC3.79□□□□□ -1.8
CCL20P78556 ARL4AP5-201ENST00000404372 599 ntBASIC3.79□□□□□ -1.8
CCL20P78556 RN7SKP86-201ENST00000410454 332 ntBASIC3.79□□□□□ -1.8
CCL20P78556 OR6E1P-201ENST00000414424 923 ntBASIC3.79□□□□□ -1.8
CCL20P78556 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC3.79□□□□□ -1.8
CCL20P78556 MAPRE1P3-201ENST00000435438 796 ntBASIC3.79□□□□□ -1.8
CCL20P78556 AC069285.2-201ENST00000440210 275 ntBASIC3.79□□□□□ -1.8
CCL20P78556 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC3.79□□□□□ -1.8
CCL20P78556 RBMY2TP-201ENST00000451162 947 ntBASIC3.79□□□□□ -1.8
CCL20P78556 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC3.79□□□□□ -1.8
CCL20P78556 AC002553.2-201ENST00000453217 340 ntBASIC3.79□□□□□ -1.8
CCL20P78556 RPL5P30-201ENST00000465511 891 ntBASIC3.79□□□□□ -1.8
CCL20P78556 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.79□□□□□ -1.8
CCL20P78556 OR9N1P-201ENST00000491296 333 ntBASIC3.79□□□□□ -1.8
CCL20P78556 SNRPCP11-201ENST00000492453 205 ntBASIC3.79□□□□□ -1.8
CCL20P78556 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCL20P78556 HSD3BP3-201ENST00000514706 994 ntBASIC3.79□□□□□ -1.8
CCL20P78556 AC060775.1-201ENST00000518241 520 ntBASIC3.79□□□□□ -1.8
CCL20P78556 AL049872.1-201ENST00000556323 322 ntBASIC3.79□□□□□ -1.8
CCL20P78556 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC3.79□□□□□ -1.8
CCL20P78556 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.79□□□□□ -1.8
CCL20P78556 AC105036.1-201ENST00000566222 271 ntBASIC3.79□□□□□ -1.8
CCL20P78556 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC3.79□□□□□ -1.8
CCL20P78556 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC3.79□□□□□ -1.8
CCL20P78556 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC3.79□□□□□ -1.8
CCL20P78556 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC3.79□□□□□ -1.8
CCL20P78556 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.79□□□□□ -1.8
CCL20P78556 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC3.79□□□□□ -1.8
CCL20P78556 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC3.79□□□□□ -1.8
CCL20P78556 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCL20P78556 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.79□□□□□ -1.8
CCL20P78556 AC010809.3-201ENST00000621310 641 ntBASIC3.79□□□□□ -1.8
CCL20P78556 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC3.79□□□□□ -1.8
CCL20P78556 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms