Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC13P31276 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXC13P31276 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXC13P31276 MIR7-1-201ENST00000384871 110 ntBASIC5.61□□□□□ -1.51
HOXC13P31276 AC093719.1-202ENST00000392735 373 ntBASIC5.61□□□□□ -1.51
HOXC13P31276 DDX18P3-201ENST00000404856 2007 ntBASIC5.61□□□□□ -1.51
HOXC13P31276 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXC13P31276 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXC13P31276 TRGV6-201ENST00000417928 299 ntBASIC5.61□□□□□ -1.51
HOXC13P31276 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXC13P31276 AC108075.1-201ENST00000424692 529 ntBASIC5.61□□□□□ -1.51
HOXC13P31276 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC13P31276 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXC13P31276 VN1R54P-201ENST00000435210 1049 ntBASIC5.61□□□□□ -1.51
HOXC13P31276 MED28P3-201ENST00000444288 531 ntBASIC5.61□□□□□ -1.51
HOXC13P31276 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
HOXC13P31276 RN7SL447P-201ENST00000494711 245 ntBASIC5.61□□□□□ -1.51
HOXC13P31276 AC105233.1-201ENST00000498840 781 ntBASIC5.61□□□□□ -1.51
HOXC13P31276 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXC13P31276 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXC13P31276 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.61□□□□□ -1.51
HOXC13P31276 AC079075.1-201ENST00000559543 878 ntBASIC5.61□□□□□ -1.51
HOXC13P31276 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC13P31276 AP005403.1-201ENST00000579720 229 ntBASIC5.61□□□□□ -1.51
HOXC13P31276 MIR4646-201ENST00000580775 63 ntBASIC5.61□□□□□ -1.51
HOXC13P31276 MIR4480-201ENST00000582492 71 ntBASIC5.61□□□□□ -1.51
HOXC13P31276 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXC13P31276 AP000769.2-201ENST00000602344 396 ntBASIC5.61□□□□□ -1.51
HOXC13P31276 AC090953.1-201ENST00000604305 1092 ntBASIC5.61□□□□□ -1.51
HOXC13P31276 AC087783.2-201ENST00000605070 562 ntBASIC5.61□□□□□ -1.51
HOXC13P31276 FAM25E-202ENST00000608562 189 ntBASIC5.61□□□□□ -1.51
HOXC13P31276 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC13P31276 AC007786.3-201ENST00000615154 596 ntBASIC5.61□□□□□ -1.51
HOXC13P31276 AC109583.2-201ENST00000617367 129 ntBASIC5.61□□□□□ -1.51
HOXC13P31276 uc_338.7-201ENST00000621834 124 ntBASIC5.61□□□□□ -1.51
HOXC13P31276 AC073342.3-201ENST00000624211 193 ntBASIC5.61□□□□□ -1.51
HOXC13P31276 CYP4F35P-202ENST00000636121 390 ntBASIC5.61□□□□□ -1.51
HOXC13P31276 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HOXC13P31276 AC073869.8-201ENST00000641806 335 ntBASIC5.61□□□□□ -1.51
HOXC13P31276 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC13P31276 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC13P31276 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC13P31276 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXC13P31276 AC104964.3-201ENST00000606115 2860 ntBASIC5.61□□□□□ -1.51
HOXC13P31276 AC007996.1-201ENST00000620414 2821 ntBASIC5.61□□□□□ -1.51
HOXC13P31276 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC13P31276 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC13P31276 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HOXC13P31276 AC083843.2-201ENST00000568248 6253 ntBASIC5.6□□□□□ -1.51
HOXC13P31276 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.6□□□□□ -1.51
HOXC13P31276 AC009313.2-201ENST00000417893 1941 ntBASIC5.6□□□□□ -1.51
HOXC13P31276 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC13P31276 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXC13P31276 AC104118.1-201ENST00000607625 1589 ntBASIC5.6□□□□□ -1.51
HOXC13P31276 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXC13P31276 AC004158.1-201ENST00000564508 4319 ntBASIC5.6□□□□□ -1.51
HOXC13P31276 TCP11X1-202ENST00000622971 1372 ntBASIC5.6□□□□□ -1.51
HOXC13P31276 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXC13P31276 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HOXC13P31276 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HOXC13P31276 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HOXC13P31276 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC13P31276 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC13P31276 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXC13P31276 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
HOXC13P31276 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.6□□□□□ -1.51
HOXC13P31276 AL139128.1-201ENST00000413921 941 ntBASIC5.6□□□□□ -1.51
HOXC13P31276 AL133482.1-201ENST00000415988 498 ntBASIC5.6□□□□□ -1.51
HOXC13P31276 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXC13P31276 MTCO1P45-201ENST00000431457 267 ntBASIC5.6□□□□□ -1.51
HOXC13P31276 AC046176.1-201ENST00000435260 1170 ntBASIC5.6□□□□□ -1.51
HOXC13P31276 RPL21P133-201ENST00000443666 476 ntBASIC5.6□□□□□ -1.51
HOXC13P31276 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXC13P31276 VN1R48P-201ENST00000448149 1036 ntBASIC5.6□□□□□ -1.51
HOXC13P31276 EIF4A1P11-201ENST00000451239 222 ntBASIC5.6□□□□□ -1.51
HOXC13P31276 AC009220.1-201ENST00000451614 275 ntBASIC5.6□□□□□ -1.51
HOXC13P31276 AC090602.1-201ENST00000469695 252 ntBASIC5.6□□□□□ -1.51
HOXC13P31276 AC090114.3-201ENST00000479267 829 ntBASIC5.6□□□□□ -1.51
HOXC13P31276 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXC13P31276 AC109464.1-201ENST00000511091 819 ntBASIC5.6□□□□□ -1.51
HOXC13P31276 SCARNA20.4-201ENST00000516969 131 ntBASIC5.6□□□□□ -1.51
HOXC13P31276 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXC13P31276 GSTP1P1-201ENST00000548078 319 ntBASIC5.6□□□□□ -1.51
HOXC13P31276 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXC13P31276 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXC13P31276 RPL10P14-201ENST00000565265 298 ntBASIC5.6□□□□□ -1.51
HOXC13P31276 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXC13P31276 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.6□□□□□ -1.51
HOXC13P31276 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HOXC13P31276 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HOXC13P31276 RN7SL356P-201ENST00000582228 248 ntBASIC5.6□□□□□ -1.51
HOXC13P31276 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXC13P31276 MIR7853-201ENST00000584820 132 ntBASIC5.6□□□□□ -1.51
HOXC13P31276 MTCO2P22-201ENST00000603246 681 ntBASIC5.6□□□□□ -1.51
HOXC13P31276 AC010632.3-201ENST00000611377 369 ntBASIC5.6□□□□□ -1.51
HOXC13P31276 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXC13P31276 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC13P31276 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.6□□□□□ -1.51
HOXC13P31276 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC13P31276 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms