Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.82□□□□□ -1.64
HMGCS1Q01581 OR11J2P-201ENST00000555298 907 ntBASIC4.82□□□□□ -1.64
HMGCS1Q01581 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.82□□□□□ -1.64
HMGCS1Q01581 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.82□□□□□ -1.64
HMGCS1Q01581 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.82□□□□□ -1.64
HMGCS1Q01581 AC006363.1-201ENST00000603806 463 ntBASIC4.82□□□□□ -1.64
HMGCS1Q01581 AC126915.2-201ENST00000610957 190 ntBASIC4.82□□□□□ -1.64
HMGCS1Q01581 AC015914.2-201ENST00000618167 288 ntBASIC4.82□□□□□ -1.64
HMGCS1Q01581 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.82□□□□□ -1.64
HMGCS1Q01581 AC015660.5-201ENST00000623238 564 ntBASIC4.82□□□□□ -1.64
HMGCS1Q01581 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.82□□□□□ -1.64
HMGCS1Q01581 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMGCS1Q01581 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMGCS1Q01581 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMGCS1Q01581 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMGCS1Q01581 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HMGCS1Q01581 TCP11X1-202ENST00000622971 1372 ntBASIC4.81□□□□□ -1.64
HMGCS1Q01581 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HMGCS1Q01581 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HMGCS1Q01581 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMGCS1Q01581 EI24P3-201ENST00000399046 1062 ntBASIC4.81□□□□□ -1.64
HMGCS1Q01581 MIR1178-201ENST00000408396 91 ntBASIC4.81□□□□□ -1.64
HMGCS1Q01581 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.81□□□□□ -1.64
HMGCS1Q01581 QRSL1P2-201ENST00000418582 964 ntBASIC4.81□□□□□ -1.64
HMGCS1Q01581 OR2AH1P-201ENST00000425717 928 ntBASIC4.81□□□□□ -1.64
HMGCS1Q01581 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGCS1Q01581 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGCS1Q01581 AC073052.1-201ENST00000440417 714 ntBASIC4.81□□□□□ -1.64
HMGCS1Q01581 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGCS1Q01581 TCEA1P1-201ENST00000449716 880 ntBASIC4.81□□□□□ -1.64
HMGCS1Q01581 FAR2P1-206ENST00000449736 709 ntBASIC4.81□□□□□ -1.64
HMGCS1Q01581 IGHV5-78-201ENST00000450948 295 ntBASIC4.81□□□□□ -1.64
HMGCS1Q01581 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.81□□□□□ -1.64
HMGCS1Q01581 RPS17P2-201ENST00000461663 408 ntBASIC4.81□□□□□ -1.64
HMGCS1Q01581 RPS4XP14-201ENST00000493072 781 ntBASIC4.81□□□□□ -1.64
HMGCS1Q01581 IGLV2-28-201ENST00000520681 304 ntBASIC4.81□□□□□ -1.64
HMGCS1Q01581 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGCS1Q01581 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.81□□□□□ -1.64
HMGCS1Q01581 AC095055.1-201ENST00000603472 1113 ntBASIC4.81□□□□□ -1.64
HMGCS1Q01581 AL137246.1-201ENST00000607072 977 ntBASIC4.81□□□□□ -1.64
HMGCS1Q01581 AL451049.1-201ENST00000608672 497 ntBASIC4.81□□□□□ -1.64
HMGCS1Q01581 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMGCS1Q01581 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGCS1Q01581 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.81□□□□□ -1.64
HMGCS1Q01581 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HMGCS1Q01581 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMGCS1Q01581 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGCS1Q01581 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMGCS1Q01581 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMGCS1Q01581 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.8□□□□□ -1.64
HMGCS1Q01581 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMGCS1Q01581 NAMPTP1-201ENST00000440465 2514 ntBASIC4.8□□□□□ -1.64
HMGCS1Q01581 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
HMGCS1Q01581 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMGCS1Q01581 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
HMGCS1Q01581 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMGCS1Q01581 HCFC2P1-201ENST00000392864 1592 ntBASIC4.8□□□□□ -1.64
HMGCS1Q01581 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMGCS1Q01581 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
HMGCS1Q01581 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMGCS1Q01581 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMGCS1Q01581 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMGCS1Q01581 ATP5HP3-201ENST00000396994 486 ntBASIC4.8□□□□□ -1.64
HMGCS1Q01581 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.8□□□□□ -1.64
HMGCS1Q01581 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.8□□□□□ -1.64
HMGCS1Q01581 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.8□□□□□ -1.64
HMGCS1Q01581 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.8□□□□□ -1.64
HMGCS1Q01581 NPM1P19-201ENST00000450070 712 ntBASIC4.8□□□□□ -1.64
HMGCS1Q01581 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.8□□□□□ -1.64
HMGCS1Q01581 RN7SL799P-201ENST00000475891 298 ntBASIC4.8□□□□□ -1.64
HMGCS1Q01581 RN7SL222P-201ENST00000476452 299 ntBASIC4.8□□□□□ -1.64
HMGCS1Q01581 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HMGCS1Q01581 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.8□□□□□ -1.64
HMGCS1Q01581 RNA5SP92-201ENST00000516437 110 ntBASIC4.8□□□□□ -1.64
HMGCS1Q01581 FTH1P11-201ENST00000517577 551 ntBASIC4.8□□□□□ -1.64
HMGCS1Q01581 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.8□□□□□ -1.64
HMGCS1Q01581 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.8□□□□□ -1.64
HMGCS1Q01581 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.8□□□□□ -1.64
HMGCS1Q01581 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.8□□□□□ -1.64
HMGCS1Q01581 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.8□□□□□ -1.64
HMGCS1Q01581 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.8□□□□□ -1.64
HMGCS1Q01581 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMGCS1Q01581 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.8□□□□□ -1.64
HMGCS1Q01581 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.8□□□□□ -1.64
HMGCS1Q01581 AC105254.2-201ENST00000603636 436 ntBASIC4.8□□□□□ -1.64
HMGCS1Q01581 OR51C1P-201ENST00000608504 942 ntBASIC4.8□□□□□ -1.64
HMGCS1Q01581 AC099494.2-201ENST00000623371 978 ntBASIC4.8□□□□□ -1.64
HMGCS1Q01581 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.8□□□□□ -1.64
HMGCS1Q01581 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.8□□□□□ -1.64
HMGCS1Q01581 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.8□□□□□ -1.64
HMGCS1Q01581 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMGCS1Q01581 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMGCS1Q01581 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMGCS1Q01581 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMGCS1Q01581 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMGCS1Q01581 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMGCS1Q01581 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
HMGCS1Q01581 AC025574.1-201ENST00000554784 1653 ntBASIC4.8□□□□□ -1.64
HMGCS1Q01581 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMGCS1Q01581 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms