Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC103703.1-201ENST00000634783 663 ntBASIC5.89□□□□□ -1.47
COPB1P53618 MIR193BHG-214ENST00000641765 509 ntBASIC5.89□□□□□ -1.47
COPB1P53618 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.89□□□□□ -1.47
COPB1P53618 TRIM51GP-201ENST00000534741 1350 ntBASIC5.89□□□□□ -1.47
COPB1P53618 AC120036.2-201ENST00000509729 1474 ntBASIC5.89□□□□□ -1.47
COPB1P53618 AC106754.1-201ENST00000562632 1513 ntBASIC5.89□□□□□ -1.47
COPB1P53618 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
COPB1P53618 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COPB1P53618 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
COPB1P53618 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COPB1P53618 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.88□□□□□ -1.47
COPB1P53618 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COPB1P53618 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
COPB1P53618 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.88□□□□□ -1.47
COPB1P53618 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
COPB1P53618 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
COPB1P53618 OR9K1P-201ENST00000326513 941 ntBASIC5.88□□□□□ -1.47
COPB1P53618 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.88□□□□□ -1.47
COPB1P53618 LYPLA1P3-201ENST00000402650 695 ntBASIC5.88□□□□□ -1.47
COPB1P53618 RN7SKP229-201ENST00000410465 302 ntBASIC5.88□□□□□ -1.47
COPB1P53618 AL024507.1-201ENST00000412741 274 ntBASIC5.88□□□□□ -1.47
COPB1P53618 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.88□□□□□ -1.47
COPB1P53618 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.88□□□□□ -1.47
COPB1P53618 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
COPB1P53618 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.88□□□□□ -1.47
COPB1P53618 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.88□□□□□ -1.47
COPB1P53618 RPS26P4-201ENST00000431743 355 ntBASIC5.88□□□□□ -1.47
COPB1P53618 AC090018.1-201ENST00000434369 367 ntBASIC5.88□□□□□ -1.47
COPB1P53618 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.88□□□□□ -1.47
COPB1P53618 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.88□□□□□ -1.47
COPB1P53618 AC007998.1-201ENST00000474156 672 ntBASIC5.88□□□□□ -1.47
COPB1P53618 NPM1P17-201ENST00000479221 602 ntBASIC5.88□□□□□ -1.47
COPB1P53618 MYL12BP2-201ENST00000503948 512 ntBASIC5.88□□□□□ -1.47
COPB1P53618 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.88□□□□□ -1.47
COPB1P53618 SOX5P1-201ENST00000524155 1127 ntBASIC5.88□□□□□ -1.47
COPB1P53618 AP004607.2-201ENST00000533949 322 ntBASIC5.88□□□□□ -1.47
COPB1P53618 UBTFL9-201ENST00000534504 1148 ntBASIC5.88□□□□□ -1.47
COPB1P53618 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.88□□□□□ -1.47
COPB1P53618 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.88□□□□□ -1.47
COPB1P53618 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.88□□□□□ -1.47
COPB1P53618 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.88□□□□□ -1.47
COPB1P53618 AC107993.1-201ENST00000591343 684 ntBASIC5.88□□□□□ -1.47
COPB1P53618 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.88□□□□□ -1.47
COPB1P53618 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.88□□□□□ -1.47
COPB1P53618 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COPB1P53618 AC009027.1-201ENST00000604510 479 ntBASIC5.88□□□□□ -1.47
COPB1P53618 AC112220.2-201ENST00000605513 533 ntBASIC5.88□□□□□ -1.47
COPB1P53618 AP000864.1-201ENST00000609424 650 ntBASIC5.88□□□□□ -1.47
COPB1P53618 AC109583.2-201ENST00000617367 129 ntBASIC5.88□□□□□ -1.47
COPB1P53618 AL645927.2-201ENST00000618350 349 ntBASIC5.88□□□□□ -1.47
COPB1P53618 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.88□□□□□ -1.47
COPB1P53618 AC013437.2-201ENST00000639587 677 ntBASIC5.88□□□□□ -1.47
COPB1P53618 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COPB1P53618 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.88□□□□□ -1.47
COPB1P53618 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
COPB1P53618 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.88□□□□□ -1.47
COPB1P53618 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
COPB1P53618 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.88□□□□□ -1.47
COPB1P53618 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COPB1P53618 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COPB1P53618 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
COPB1P53618 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.87□□□□□ -1.47
COPB1P53618 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
COPB1P53618 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COPB1P53618 AC125336.1-201ENST00000508893 2827 ntBASIC5.87□□□□□ -1.47
COPB1P53618 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.87□□□□□ -1.47
COPB1P53618 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.87□□□□□ -1.47
COPB1P53618 RN7SKP28-201ENST00000364770 305 ntBASIC5.87□□□□□ -1.47
COPB1P53618 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.87□□□□□ -1.47
COPB1P53618 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
COPB1P53618 MTCO2P8-201ENST00000412213 658 ntBASIC5.87□□□□□ -1.47
COPB1P53618 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.87□□□□□ -1.47
COPB1P53618 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.87□□□□□ -1.47
COPB1P53618 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.87□□□□□ -1.47
COPB1P53618 AC093155.2-201ENST00000420734 937 ntBASIC5.87□□□□□ -1.47
COPB1P53618 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.87□□□□□ -1.47
COPB1P53618 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COPB1P53618 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.87□□□□□ -1.47
COPB1P53618 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.87□□□□□ -1.47
COPB1P53618 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.87□□□□□ -1.47
COPB1P53618 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.87□□□□□ -1.47
COPB1P53618 FMO7P-201ENST00000436045 768 ntBASIC5.87□□□□□ -1.47
COPB1P53618 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.87□□□□□ -1.47
COPB1P53618 NOP56P2-201ENST00000447491 769 ntBASIC5.87□□□□□ -1.47
COPB1P53618 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.87□□□□□ -1.47
COPB1P53618 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.87□□□□□ -1.47
COPB1P53618 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.87□□□□□ -1.47
COPB1P53618 AC245028.2-201ENST00000458673 253 ntBASIC5.87□□□□□ -1.47
COPB1P53618 AC021660.1-201ENST00000465006 554 ntBASIC5.87□□□□□ -1.47
COPB1P53618 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.87□□□□□ -1.47
COPB1P53618 RN7SL205P-201ENST00000490174 284 ntBASIC5.87□□□□□ -1.47
COPB1P53618 EIF3LP3-201ENST00000495197 822 ntBASIC5.87□□□□□ -1.47
COPB1P53618 ENPP7P11-201ENST00000505915 627 ntBASIC5.87□□□□□ -1.47
COPB1P53618 FABP5P6-201ENST00000510588 409 ntBASIC5.87□□□□□ -1.47
COPB1P53618 AP003355.1-201ENST00000518956 587 ntBASIC5.87□□□□□ -1.47
COPB1P53618 AC100784.1-201ENST00000522790 310 ntBASIC5.87□□□□□ -1.47
COPB1P53618 AC104115.2-201ENST00000523026 687 ntBASIC5.87□□□□□ -1.47
COPB1P53618 OR4V1P-201ENST00000525394 1140 ntBASIC5.87□□□□□ -1.47
COPB1P53618 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.87□□□□□ -1.47
COPB1P53618 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms