Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Hmg20bQ9Z104 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hmg20bQ9Z104 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Hmg20bQ9Z104 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hmg20bQ9Z104 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Hmg20bQ9Z104 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.76■□□□□ 0.75
Hmg20bQ9Z104 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.76■□□□□ 0.75
Hmg20bQ9Z104 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hmg20bQ9Z104 Gm18115-201ENSMUST00000221209 621 ntBASIC19.76■□□□□ 0.75
Hmg20bQ9Z104 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.76■□□□□ 0.75
Hmg20bQ9Z104 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hmg20bQ9Z104 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.76■□□□□ 0.75
Hmg20bQ9Z104 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Hmg20bQ9Z104 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hmg20bQ9Z104 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hmg20bQ9Z104 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hmg20bQ9Z104 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Hmg20bQ9Z104 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hmg20bQ9Z104 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hmg20bQ9Z104 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hmg20bQ9Z104 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hmg20bQ9Z104 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hmg20bQ9Z104 Gm7213-201ENSMUST00000215977 950 ntBASIC19.75■□□□□ 0.75
Hmg20bQ9Z104 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hmg20bQ9Z104 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Hmg20bQ9Z104 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hmg20bQ9Z104 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hmg20bQ9Z104 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hmg20bQ9Z104 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hmg20bQ9Z104 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.75■□□□□ 0.75
Hmg20bQ9Z104 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Hmg20bQ9Z104 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hmg20bQ9Z104 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hmg20bQ9Z104 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 Phf7-203ENSMUST00000226565 1971 ntBASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 Gm15565-201ENSMUST00000118890 427 ntBASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 Gm45058-201ENSMUST00000205810 766 ntBASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Hmg20bQ9Z104 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hmg20bQ9Z104 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hmg20bQ9Z104 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hmg20bQ9Z104 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hmg20bQ9Z104 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.73■□□□□ 0.75
Hmg20bQ9Z104 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Hmg20bQ9Z104 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hmg20bQ9Z104 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hmg20bQ9Z104 Mir1668-201ENSMUST00000184114 107 ntBASIC19.73■□□□□ 0.75
Hmg20bQ9Z104 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.73■□□□□ 0.75
Hmg20bQ9Z104 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Hmg20bQ9Z104 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Hmg20bQ9Z104 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Hmg20bQ9Z104 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hmg20bQ9Z104 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Hmg20bQ9Z104 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Hmg20bQ9Z104 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hmg20bQ9Z104 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hmg20bQ9Z104 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hmg20bQ9Z104 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.73■□□□□ 0.75
Hmg20bQ9Z104 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Hmg20bQ9Z104 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hmg20bQ9Z104 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hmg20bQ9Z104 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hmg20bQ9Z104 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Hmg20bQ9Z104 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.72■□□□□ 0.75
Hmg20bQ9Z104 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Hmg20bQ9Z104 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hmg20bQ9Z104 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.72■□□□□ 0.75
Hmg20bQ9Z104 Mir5130-201ENSMUST00000175160 84 ntBASIC19.72■□□□□ 0.75
Hmg20bQ9Z104 Gm18959-201ENSMUST00000208954 655 ntBASIC19.72■□□□□ 0.75
Hmg20bQ9Z104 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hmg20bQ9Z104 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hmg20bQ9Z104 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hmg20bQ9Z104 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hmg20bQ9Z104 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hmg20bQ9Z104 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Hmg20bQ9Z104 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmg20bQ9Z104 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms