Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1h3Q9Z0Y9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1h3Q9Z0Y9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1h3Q9Z0Y9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1h3Q9Z0Y9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1h3Q9Z0Y9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Nr1h3Q9Z0Y9 Gm11336-201ENSMUST00000118168 334 ntBASIC18.18■□□□□ 0.5
Nr1h3Q9Z0Y9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.18■□□□□ 0.5
Nr1h3Q9Z0Y9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Nr1h3Q9Z0Y9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.18■□□□□ 0.5
Nr1h3Q9Z0Y9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1h3Q9Z0Y9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1h3Q9Z0Y9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.18■□□□□ 0.5
Nr1h3Q9Z0Y9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1h3Q9Z0Y9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Nr1h3Q9Z0Y9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1h3Q9Z0Y9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Nr1h3Q9Z0Y9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1h3Q9Z0Y9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Nr1h3Q9Z0Y9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Nr1h3Q9Z0Y9 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Nr1h3Q9Z0Y9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nr1h3Q9Z0Y9 Olfr129-201ENSMUST00000122318 993 ntBASIC18.17■□□□□ 0.5
Nr1h3Q9Z0Y9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nr1h3Q9Z0Y9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.17■□□□□ 0.5
Nr1h3Q9Z0Y9 Gm18115-201ENSMUST00000221209 621 ntBASIC18.17■□□□□ 0.5
Nr1h3Q9Z0Y9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nr1h3Q9Z0Y9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nr1h3Q9Z0Y9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Nr1h3Q9Z0Y9 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.17■□□□□ 0.5
Nr1h3Q9Z0Y9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.16■□□□□ 0.5
Nr1h3Q9Z0Y9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1h3Q9Z0Y9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1h3Q9Z0Y9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1h3Q9Z0Y9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.16■□□□□ 0.5
Nr1h3Q9Z0Y9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Nr1h3Q9Z0Y9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1h3Q9Z0Y9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1h3Q9Z0Y9 Gm24589-201ENSMUST00000116692 94 ntBASIC18.16■□□□□ 0.5
Nr1h3Q9Z0Y9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1h3Q9Z0Y9 Gm27000-201ENSMUST00000182943 842 ntBASIC18.16■□□□□ 0.5
Nr1h3Q9Z0Y9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1h3Q9Z0Y9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1h3Q9Z0Y9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1h3Q9Z0Y9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Nr1h3Q9Z0Y9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1h3Q9Z0Y9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1h3Q9Z0Y9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Nr1h3Q9Z0Y9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1h3Q9Z0Y9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1h3Q9Z0Y9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1h3Q9Z0Y9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1h3Q9Z0Y9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Nr1h3Q9Z0Y9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.15■□□□□ 0.5
Nr1h3Q9Z0Y9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1h3Q9Z0Y9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1h3Q9Z0Y9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1h3Q9Z0Y9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1h3Q9Z0Y9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1h3Q9Z0Y9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1h3Q9Z0Y9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1h3Q9Z0Y9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1h3Q9Z0Y9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Nr1h3Q9Z0Y9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1h3Q9Z0Y9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nr1h3Q9Z0Y9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nr1h3Q9Z0Y9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nr1h3Q9Z0Y9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1h3Q9Z0Y9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1h3Q9Z0Y9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Nr1h3Q9Z0Y9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1h3Q9Z0Y9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1h3Q9Z0Y9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1h3Q9Z0Y9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1h3Q9Z0Y9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1h3Q9Z0Y9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1h3Q9Z0Y9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.14■□□□□ 0.49
Nr1h3Q9Z0Y9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Nr1h3Q9Z0Y9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Nr1h3Q9Z0Y9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Nr1h3Q9Z0Y9 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.14■□□□□ 0.49
Nr1h3Q9Z0Y9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1h3Q9Z0Y9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Nr1h3Q9Z0Y9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1h3Q9Z0Y9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.13■□□□□ 0.49
Nr1h3Q9Z0Y9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1h3Q9Z0Y9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1h3Q9Z0Y9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1h3Q9Z0Y9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1h3Q9Z0Y9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1h3Q9Z0Y9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1h3Q9Z0Y9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1h3Q9Z0Y9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1h3Q9Z0Y9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.13■□□□□ 0.49
Nr1h3Q9Z0Y9 Gm15794-201ENSMUST00000120182 631 ntBASIC18.13■□□□□ 0.49
Nr1h3Q9Z0Y9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Nr1h3Q9Z0Y9 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.13■□□□□ 0.49
Nr1h3Q9Z0Y9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Nr1h3Q9Z0Y9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Nr1h3Q9Z0Y9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms