Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr2e3Q9QXZ7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr2e3Q9QXZ7 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nr2e3Q9QXZ7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr2e3Q9QXZ7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr2e3Q9QXZ7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr2e3Q9QXZ7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nr2e3Q9QXZ7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr2e3Q9QXZ7 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Nr2e3Q9QXZ7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr2e3Q9QXZ7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.96■□□□□ 0.63
Nr2e3Q9QXZ7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nr2e3Q9QXZ7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.96■□□□□ 0.63
Nr2e3Q9QXZ7 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr2e3Q9QXZ7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nr2e3Q9QXZ7 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nr2e3Q9QXZ7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr2e3Q9QXZ7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr2e3Q9QXZ7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nr2e3Q9QXZ7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nr2e3Q9QXZ7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr2e3Q9QXZ7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nr2e3Q9QXZ7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr2e3Q9QXZ7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr2e3Q9QXZ7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Nr2e3Q9QXZ7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr2e3Q9QXZ7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.95■□□□□ 0.62
Nr2e3Q9QXZ7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr2e3Q9QXZ7 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr2e3Q9QXZ7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr2e3Q9QXZ7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.95■□□□□ 0.62
Nr2e3Q9QXZ7 Gm18115-201ENSMUST00000221209 621 ntBASIC18.95■□□□□ 0.62
Nr2e3Q9QXZ7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr2e3Q9QXZ7 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr2e3Q9QXZ7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.95■□□□□ 0.62
Nr2e3Q9QXZ7 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr2e3Q9QXZ7 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr2e3Q9QXZ7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr2e3Q9QXZ7 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.95■□□□□ 0.62
Nr2e3Q9QXZ7 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr2e3Q9QXZ7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Nr2e3Q9QXZ7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nr2e3Q9QXZ7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nr2e3Q9QXZ7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr2e3Q9QXZ7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nr2e3Q9QXZ7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr2e3Q9QXZ7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr2e3Q9QXZ7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr2e3Q9QXZ7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Nr2e3Q9QXZ7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nr2e3Q9QXZ7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr2e3Q9QXZ7 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.94■□□□□ 0.62
Nr2e3Q9QXZ7 Gm11336-201ENSMUST00000118168 334 ntBASIC18.94■□□□□ 0.62
Nr2e3Q9QXZ7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.94■□□□□ 0.62
Nr2e3Q9QXZ7 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nr2e3Q9QXZ7 Gm6659-201ENSMUST00000174752 547 ntBASIC18.94■□□□□ 0.62
Nr2e3Q9QXZ7 Gm44450-201ENSMUST00000199528 114 ntBASIC18.94■□□□□ 0.62
Nr2e3Q9QXZ7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nr2e3Q9QXZ7 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nr2e3Q9QXZ7 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.94■□□□□ 0.62
Nr2e3Q9QXZ7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nr2e3Q9QXZ7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nr2e3Q9QXZ7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nr2e3Q9QXZ7 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nr2e3Q9QXZ7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nr2e3Q9QXZ7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Nr2e3Q9QXZ7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nr2e3Q9QXZ7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nr2e3Q9QXZ7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nr2e3Q9QXZ7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nr2e3Q9QXZ7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Nr2e3Q9QXZ7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Nr2e3Q9QXZ7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nr2e3Q9QXZ7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.93■□□□□ 0.62
Nr2e3Q9QXZ7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nr2e3Q9QXZ7 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.93■□□□□ 0.62
Nr2e3Q9QXZ7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Nr2e3Q9QXZ7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nr2e3Q9QXZ7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nr2e3Q9QXZ7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nr2e3Q9QXZ7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nr2e3Q9QXZ7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nr2e3Q9QXZ7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nr2e3Q9QXZ7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nr2e3Q9QXZ7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nr2e3Q9QXZ7 Gm11355-201ENSMUST00000121120 306 ntBASIC18.92■□□□□ 0.62
Nr2e3Q9QXZ7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nr2e3Q9QXZ7 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Nr2e3Q9QXZ7 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Nr2e3Q9QXZ7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.92■□□□□ 0.62
Nr2e3Q9QXZ7 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nr2e3Q9QXZ7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.91■□□□□ 0.62
Nr2e3Q9QXZ7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Nr2e3Q9QXZ7 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nr2e3Q9QXZ7 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nr2e3Q9QXZ7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nr2e3Q9QXZ7 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nr2e3Q9QXZ7 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.91■□□□□ 0.62
Nr2e3Q9QXZ7 Gm37722-201ENSMUST00000193757 208 ntBASIC18.91■□□□□ 0.62
Nr2e3Q9QXZ7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms