Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx5Q9JL61 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Rfx5Q9JL61 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx5Q9JL61 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx5Q9JL61 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx5Q9JL61 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx5Q9JL61 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx5Q9JL61 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rfx5Q9JL61 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Rfx5Q9JL61 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx5Q9JL61 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rfx5Q9JL61 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx5Q9JL61 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx5Q9JL61 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx5Q9JL61 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.7■□□□□ 0.42
Rfx5Q9JL61 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rfx5Q9JL61 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.7■□□□□ 0.42
Rfx5Q9JL61 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.7■□□□□ 0.42
Rfx5Q9JL61 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.7■□□□□ 0.42
Rfx5Q9JL61 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rfx5Q9JL61 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx5Q9JL61 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx5Q9JL61 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rfx5Q9JL61 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.7■□□□□ 0.42
Rfx5Q9JL61 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx5Q9JL61 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx5Q9JL61 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx5Q9JL61 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx5Q9JL61 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx5Q9JL61 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.7■□□□□ 0.42
Rfx5Q9JL61 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Rfx5Q9JL61 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx5Q9JL61 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rfx5Q9JL61 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.69■□□□□ 0.42
Rfx5Q9JL61 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.69■□□□□ 0.42
Rfx5Q9JL61 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.69■□□□□ 0.42
Rfx5Q9JL61 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.69■□□□□ 0.42
Rfx5Q9JL61 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx5Q9JL61 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx5Q9JL61 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx5Q9JL61 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx5Q9JL61 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx5Q9JL61 Gm29707-201ENSMUST00000196325 491 ntBASIC17.69■□□□□ 0.42
Rfx5Q9JL61 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.69■□□□□ 0.42
Rfx5Q9JL61 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Rfx5Q9JL61 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx5Q9JL61 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx5Q9JL61 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx5Q9JL61 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rfx5Q9JL61 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx5Q9JL61 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx5Q9JL61 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx5Q9JL61 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx5Q9JL61 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx5Q9JL61 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx5Q9JL61 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx5Q9JL61 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx5Q9JL61 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx5Q9JL61 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.68■□□□□ 0.42
Rfx5Q9JL61 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rfx5Q9JL61 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx5Q9JL61 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx5Q9JL61 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx5Q9JL61 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx5Q9JL61 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx5Q9JL61 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.68■□□□□ 0.42
Rfx5Q9JL61 Gm25016-201ENSMUST00000158399 131 ntBASIC17.68■□□□□ 0.42
Rfx5Q9JL61 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.68■□□□□ 0.42
Rfx5Q9JL61 Gm29518-201ENSMUST00000190858 372 ntBASIC17.68■□□□□ 0.42
Rfx5Q9JL61 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.68■□□□□ 0.42
Rfx5Q9JL61 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx5Q9JL61 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx5Q9JL61 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx5Q9JL61 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx5Q9JL61 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx5Q9JL61 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx5Q9JL61 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms