Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.27■□□□□ 0.36
Scn5aQ9JJV9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn5aQ9JJV9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn5aQ9JJV9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn5aQ9JJV9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn5aQ9JJV9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
Scn5aQ9JJV9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.27■□□□□ 0.36
Scn5aQ9JJV9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scn5aQ9JJV9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.27■□□□□ 0.36
Scn5aQ9JJV9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.27■□□□□ 0.36
Scn5aQ9JJV9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn5aQ9JJV9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn5aQ9JJV9 Gm7230-201ENSMUST00000173026 815 ntBASIC17.27■□□□□ 0.36
Scn5aQ9JJV9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.27■□□□□ 0.36
Scn5aQ9JJV9 Gm5264-201ENSMUST00000190584 848 ntBASIC17.27■□□□□ 0.36
Scn5aQ9JJV9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Scn5aQ9JJV9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scn5aQ9JJV9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn5aQ9JJV9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn5aQ9JJV9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn5aQ9JJV9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Scn5aQ9JJV9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn5aQ9JJV9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn5aQ9JJV9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn5aQ9JJV9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.26■□□□□ 0.35
Scn5aQ9JJV9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn5aQ9JJV9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn5aQ9JJV9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn5aQ9JJV9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.26■□□□□ 0.35
Scn5aQ9JJV9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.26■□□□□ 0.35
Scn5aQ9JJV9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn5aQ9JJV9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn5aQ9JJV9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Scn5aQ9JJV9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn5aQ9JJV9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn5aQ9JJV9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn5aQ9JJV9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn5aQ9JJV9 Gm13312-201ENSMUST00000119631 718 ntBASIC17.26■□□□□ 0.35
Scn5aQ9JJV9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.26■□□□□ 0.35
Scn5aQ9JJV9 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn5aQ9JJV9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn5aQ9JJV9 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Scn5aQ9JJV9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn5aQ9JJV9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.26■□□□□ 0.35
Scn5aQ9JJV9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn5aQ9JJV9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 Gm7862-201ENSMUST00000121461 292 ntBASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn5aQ9JJV9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Scn5aQ9JJV9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn5aQ9JJV9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Scn5aQ9JJV9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn5aQ9JJV9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn5aQ9JJV9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Scn5aQ9JJV9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Scn5aQ9JJV9 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.24■□□□□ 0.35
Scn5aQ9JJV9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.24■□□□□ 0.35
Scn5aQ9JJV9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Scn5aQ9JJV9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn5aQ9JJV9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Scn5aQ9JJV9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scn5aQ9JJV9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn5aQ9JJV9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn5aQ9JJV9 Gm25990-201ENSMUST00000102440 86 ntBASIC17.23■□□□□ 0.35
Scn5aQ9JJV9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn5aQ9JJV9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn5aQ9JJV9 Gm15173-201ENSMUST00000122049 433 ntBASIC17.23■□□□□ 0.35
Scn5aQ9JJV9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.23■□□□□ 0.35
Scn5aQ9JJV9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scn5aQ9JJV9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.23■□□□□ 0.35
Scn5aQ9JJV9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.23■□□□□ 0.35
Scn5aQ9JJV9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn5aQ9JJV9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn5aQ9JJV9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms