Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.62□□□□□ -0.23
Rhox4bQ9JI43 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rhox4bQ9JI43 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rhox4bQ9JI43 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rhox4bQ9JI43 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rhox4bQ9JI43 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rhox4bQ9JI43 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rhox4bQ9JI43 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rhox4bQ9JI43 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rhox4bQ9JI43 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rhox4bQ9JI43 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC13.61□□□□□ -0.23
Rhox4bQ9JI43 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC13.61□□□□□ -0.23
Rhox4bQ9JI43 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rhox4bQ9JI43 Gm13241-201ENSMUST00000094493 780 ntBASIC13.61□□□□□ -0.23
Rhox4bQ9JI43 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rhox4bQ9JI43 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rhox4bQ9JI43 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rhox4bQ9JI43 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rhox4bQ9JI43 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rhox4bQ9JI43 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rhox4bQ9JI43 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rhox4bQ9JI43 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rhox4bQ9JI43 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rhox4bQ9JI43 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Rhox4bQ9JI43 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rhox4bQ9JI43 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Mir8112-201ENSMUST00000184382 131 ntBASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rhox4bQ9JI43 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rhox4bQ9JI43 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rhox4bQ9JI43 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rhox4bQ9JI43 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rhox4bQ9JI43 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rhox4bQ9JI43 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rhox4bQ9JI43 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rhox4bQ9JI43 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rhox4bQ9JI43 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rhox4bQ9JI43 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rhox4bQ9JI43 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rhox4bQ9JI43 Gm9988-201ENSMUST00000069786 435 ntBASIC13.59□□□□□ -0.23
Rhox4bQ9JI43 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rhox4bQ9JI43 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rhox4bQ9JI43 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rhox4bQ9JI43 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rhox4bQ9JI43 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rhox4bQ9JI43 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Rhox4bQ9JI43 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rhox4bQ9JI43 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rhox4bQ9JI43 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rhox4bQ9JI43 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rhox4bQ9JI43 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rhox4bQ9JI43 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rhox4bQ9JI43 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rhox4bQ9JI43 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms