Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClpxQ9JHS4 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.36■□□□□ 0.05
ClpxQ9JHS4 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClpxQ9JHS4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClpxQ9JHS4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClpxQ9JHS4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
ClpxQ9JHS4 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClpxQ9JHS4 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClpxQ9JHS4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ClpxQ9JHS4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClpxQ9JHS4 Gm18666-201ENSMUST00000190039 958 ntBASIC15.36■□□□□ 0.05
ClpxQ9JHS4 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ClpxQ9JHS4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.36■□□□□ 0.05
ClpxQ9JHS4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
ClpxQ9JHS4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
ClpxQ9JHS4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClpxQ9JHS4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClpxQ9JHS4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClpxQ9JHS4 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClpxQ9JHS4 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
ClpxQ9JHS4 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
ClpxQ9JHS4 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClpxQ9JHS4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClpxQ9JHS4 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
ClpxQ9JHS4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.35■□□□□ 0.05
ClpxQ9JHS4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ClpxQ9JHS4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ClpxQ9JHS4 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ClpxQ9JHS4 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ClpxQ9JHS4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ClpxQ9JHS4 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ClpxQ9JHS4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ClpxQ9JHS4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ClpxQ9JHS4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ClpxQ9JHS4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
ClpxQ9JHS4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.35■□□□□ 0.05
ClpxQ9JHS4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ClpxQ9JHS4 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ClpxQ9JHS4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ClpxQ9JHS4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ClpxQ9JHS4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ClpxQ9JHS4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ClpxQ9JHS4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ClpxQ9JHS4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
ClpxQ9JHS4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
ClpxQ9JHS4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ClpxQ9JHS4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
ClpxQ9JHS4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ClpxQ9JHS4 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ClpxQ9JHS4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ClpxQ9JHS4 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
ClpxQ9JHS4 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ClpxQ9JHS4 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ClpxQ9JHS4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
ClpxQ9JHS4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ClpxQ9JHS4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.34■□□□□ 0.05
ClpxQ9JHS4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.34■□□□□ 0.05
ClpxQ9JHS4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ClpxQ9JHS4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.34■□□□□ 0.05
ClpxQ9JHS4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ClpxQ9JHS4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ClpxQ9JHS4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ClpxQ9JHS4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
ClpxQ9JHS4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ClpxQ9JHS4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ClpxQ9JHS4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.34■□□□□ 0.05
ClpxQ9JHS4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ClpxQ9JHS4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ClpxQ9JHS4 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ClpxQ9JHS4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ClpxQ9JHS4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ClpxQ9JHS4 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
ClpxQ9JHS4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
ClpxQ9JHS4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ClpxQ9JHS4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
ClpxQ9JHS4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ClpxQ9JHS4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
ClpxQ9JHS4 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
ClpxQ9JHS4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
ClpxQ9JHS4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ClpxQ9JHS4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ClpxQ9JHS4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ClpxQ9JHS4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ClpxQ9JHS4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ClpxQ9JHS4 Gm11249-201ENSMUST00000117071 859 ntBASIC15.33■□□□□ 0.04
ClpxQ9JHS4 Gm13158-201ENSMUST00000122007 736 ntBASIC15.33■□□□□ 0.04
ClpxQ9JHS4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ClpxQ9JHS4 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ClpxQ9JHS4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ClpxQ9JHS4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ClpxQ9JHS4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ClpxQ9JHS4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
ClpxQ9JHS4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.33■□□□□ 0.04
ClpxQ9JHS4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ClpxQ9JHS4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
ClpxQ9JHS4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ClpxQ9JHS4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ClpxQ9JHS4 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ClpxQ9JHS4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ClpxQ9JHS4 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms